RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 TCTN1Q2MV58 587 aa18.08■□□□□ 0.48
AP1S3-202ENST00000396653 CCDC47Q96A33 483 aaKnown RBP18.08■□□□□ 0.48
AP1S3-202ENST00000396653 UBE2OQ9C0C9 1292 aaKnown RBP18.08■□□□□ 0.48
AP1S3-202ENST00000396653 PRO3102Q9H379 93 aa18.08■□□□□ 0.48
AP1S3-202ENST00000396653 TMX1Q9H3N1 280 aa18.08■□□□□ 0.48
AP1S3-202ENST00000396653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
AP1S3-202ENST00000396653 DENND3A2RUS2 1198 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 PPP1R37O75864 691 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 PTMSP20962 102 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 FGFR4P22455 802 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 NCBP1Q09161 790 aaKnown RBP18.07■□□□□ 0.48
AP1S3-202ENST00000396653 KCNB1Q14721 858 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 FAM26FQ5R3K3 315 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 RASIP1Q5U651 963 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 PRPF38BQ5VTL8 546 aaKnown RBP18.07■□□□□ 0.48
AP1S3-202ENST00000396653 STXBP4Q6ZWJ1 553 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 TAS1R3Q7RTX0 852 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 ZNF720Q7Z2F6 126 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 TRAIPQ9BWF2 469 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 STRA6Q9BX79 667 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 TSPYL2Q9H2G4 693 aaPredicted RBP18.07■□□□□ 0.48
AP1S3-202ENST00000396653 MRPL44Q9H9J2 332 aaKnown RBP18.07■□□□□ 0.48
AP1S3-202ENST00000396653 C1orf112Q9NSG2 853 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 EXOC1Q9NV70 894 aa18.07■□□□□ 0.48
AP1S3-202ENST00000396653 PIN4Q9Y237 131 aaKnown RBP18.07■□□□□ 0.48
AP1S3-202ENST00000396653 UBE4BO95155 1302 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 RHOBTB3O94955 611 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 SMC2O95347 1197 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 RPN1P04843 607 aaKnown RBP18.06■□□□□ 0.48
AP1S3-202ENST00000396653 ZSCAN20P17040 1043 aaPredicted RBP18.06■□□□□ 0.48
AP1S3-202ENST00000396653 ARF4P18085 180 aaPredicted RBP18.06■□□□□ 0.48
AP1S3-202ENST00000396653 NMT1P30419 496 aaKnown RBP18.06■□□□□ 0.48
AP1S3-202ENST00000396653 STRN3Q13033 797 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 PSMD2Q13200 908 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 PNOCQ13519 176 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 PRPF4BQ13523 1007 aaKnown RBP18.06■□□□□ 0.48
AP1S3-202ENST00000396653 KMT5BQ4FZB7 885 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 NOTUMQ6P988 496 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 MAP4K3Q8IVH8 894 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 SPATA20Q8TB22 786 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 LINC01599Q8WXQ3 324 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 MRPL4Q9BYD3 311 aaKnown RBP18.06■□□□□ 0.48
AP1S3-202ENST00000396653 RGS18Q9NS28 235 aa18.06■□□□□ 0.48
AP1S3-202ENST00000396653 EIF3DO15371 548 aaKnown RBP eCLIP18.05■□□□□ 0.48
AP1S3-202ENST00000396653 MGEA5O60502 916 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 GCNT3O95395 438 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 PIGRP01833 764 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 HOXA11P31270 313 aaPredicted RBP18.05■□□□□ 0.48
AP1S3-202ENST00000396653 KCNJ6P48051 423 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 WDR5P61964 334 aaKnown RBP18.05■□□□□ 0.48
AP1S3-202ENST00000396653 ZPBP2Q6X784 338 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 OTOP2Q7RTS6 562 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 GPT2Q8TD30 523 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 GSDMAQ96QA5 445 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 ADAM2Q99965 735 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 CLSTN2Q9H4D0 955 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
AP1S3-202ENST00000396653 RMND1Q9NWS8 449 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 TBX20Q9UMR3 447 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 PCDHB13Q9Y5F0 798 aa18.05■□□□□ 0.48
AP1S3-202ENST00000396653 A0A1B0GUA9 196 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.04■□□□□ 0.48
AP1S3-202ENST00000396653 A0A1W2PPC1 479 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 N4BP3O15049 544 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 B4GALT5O43286 388 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 EDN1P05305 212 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 RAB27AP51159 221 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 C9orf50Q5SZB4 431 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 L1TD1Q5T7N2 865 aaKnown RBP18.04■□□□□ 0.48
AP1S3-202ENST00000396653 NT5DC1Q5TFE4 455 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 SLC24A5Q71RS6 500 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 RTN4RL1Q86UN2 441 aaPredicted RBP18.04■□□□□ 0.48
AP1S3-202ENST00000396653 SMARCE1Q969G3 411 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 RNPC3Q96LT9 517 aaKnown RBP18.04■□□□□ 0.48
AP1S3-202ENST00000396653 SLC9A7Q96T83 725 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 GTPBP4Q9BZE4 634 aaKnown RBP18.04■□□□□ 0.48
AP1S3-202ENST00000396653 TBC1D7Q9P0N9 293 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 TNFSF13BQ9Y275 285 aa18.04■□□□□ 0.48
AP1S3-202ENST00000396653 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 C9IYK1 514 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 ENPP3O14638 875 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 AMHP03971 560 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 SKIP12755 728 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 SARSP49591 514 aaKnown RBP18.03■□□□□ 0.48
AP1S3-202ENST00000396653 SHHQ15465 462 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 ATF7IP2Q5U623 682 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 TWF2Q6IBS0 349 aaKnown RBP18.03■□□□□ 0.48
AP1S3-202ENST00000396653 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 EPM2AIP1Q7L775 607 aaPredicted RBP18.03■□□□□ 0.48
AP1S3-202ENST00000396653 APBB1IPQ7Z5R6 666 aaPredicted RBP18.03■□□□□ 0.48
AP1S3-202ENST00000396653 TDHQ8IZJ6 230 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 PHOSPHO2Q8TCD6 241 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 CPB2Q96IY4 423 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 ACO2Q99798 780 aaKnown RBP18.03■□□□□ 0.48
AP1S3-202ENST00000396653 FGFBP2Q9BYJ0 223 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 ELAC1Q9H777 363 aaKnown RBP18.03■□□□□ 0.48
AP1S3-202ENST00000396653 EXOC7Q9UPT5 735 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 PCDHA5Q9Y5H7 936 aa18.03■□□□□ 0.48
AP1S3-202ENST00000396653 GBF1Q92538 1859 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms