RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 SPDYE3A6NKU9 549 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 RSPH10B2B2RC85 870 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 EYA4O95677 639 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 RSPH10BP0C881 870 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 ALAS1P13196 640 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 GAP43P17677 238 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 CIITAP33076 1130 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 PSMC2P35998 433 aaKnown RBP14.38□□□□□ -0.11
TRIM40-207ENST00000396581 FMO5P49326 533 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 ADCY2Q08462 1091 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 RIPK1Q13546 671 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
TRIM40-207ENST00000396581 DENND2CQ68D51 928 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 TLDC1Q6P9B6 456 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 ANKS4BQ8N8V4 417 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 FAM151AQ8WW52 585 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 ALG3Q92685 438 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 CSRNP1Q96S65 589 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 P2RX7Q99572 595 aaKnown RBP14.38□□□□□ -0.11
TRIM40-207ENST00000396581 ATP6V0A4Q9HBG4 840 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 RASAL2Q9UJF2 1139 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 ODF2LQ9ULJ1 636 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 TRPC6Q9Y210 931 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 SYNGAP1Q96PV0 1343 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 FAM196BA6NMK8 535 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
TRIM40-207ENST00000396581 MEIS1O00470 390 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 PHF2O75151 1096 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 GCNT3O95395 438 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 CTNNA2P26232 953 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 CHRNA3P32297 505 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 KCNA1Q09470 495 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 KIF22Q14807 665 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 C6orf118Q5T5N4 469 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 C11orf63Q6NUN7 778 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 CRELD2Q6UXH1 353 aaPredicted RBP14.38□□□□□ -0.11
TRIM40-207ENST00000396581 KCTD1Q719H9 257 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 FBXO25Q8TCJ0 367 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 ARHGEF26Q96DR7 871 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 RUSC1Q9BVN2 902 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 DMAC2Q9NW81 257 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 NYAP2Q9P242 653 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 HERC5Q9UII4 1024 aaKnown RBP14.38□□□□□ -0.11
TRIM40-207ENST00000396581 DNAJC12Q9UKB3 198 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 VAV3Q9UKW4 847 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 PCDHB13Q9Y5F0 798 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 PCDHA1Q9Y5I3 950 aa14.38□□□□□ -0.11
TRIM40-207ENST00000396581 CLRN2A0PK11 232 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 MIF4GDA9UHW6 222 aaKnown RBP14.37□□□□□ -0.11
TRIM40-207ENST00000396581 MPHOSPH10O00566 681 aaKnown RBP14.37□□□□□ -0.11
TRIM40-207ENST00000396581 PODXLO00592 558 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 CLIC2O15247 247 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 RFX1P22670 979 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 RPS12P25398 132 aaKnown RBP14.37□□□□□ -0.11
TRIM40-207ENST00000396581 SREBF1P36956 1147 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 KCTD19Q17RG1 926 aaPredicted RBP14.37□□□□□ -0.11
TRIM40-207ENST00000396581 ZNF568Q3ZCX4 644 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 RHOT2Q8IXI1 618 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 GLG1Q92896 1179 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 PARP2Q9UGN5 583 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 COG5Q9UP83 839 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 UBE4BO95155 1302 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 TCP10L2B9ZVM9 353 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 FZD9O00144 591 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 WNT10BO00744 389 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 ATP6V1G2O95670 118 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 GGPS1O95749 300 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 EZRP15311 586 aaKnown RBP14.37□□□□□ -0.11
TRIM40-207ENST00000396581 NF2P35240 595 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 ZNF280AP59817 542 aaPredicted RBP14.37□□□□□ -0.11
TRIM40-207ENST00000396581 PPARDQ03181 441 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 PPP2R5AQ15172 486 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 CYP1B1Q16678 543 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 PRR16Q569H4 304 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 MFSD5Q6N075 450 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 FAM83AQ86UY5 434 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 PRELID2Q8N945 189 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 NLGN2Q8NFZ4 835 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 UIMC1Q96RL1 719 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 THAP2Q9H0W7 228 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 BHMT2Q9H2M3 363 aa14.37□□□□□ -0.11
TRIM40-207ENST00000396581 PFASO15067 1338 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 CFAP73A6NFT4 308 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 FAM86B1E9PN63 330 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 OPLAHO14841 1288 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 RGS16O15492 202 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-207ENST00000396581 PPP1R12BO60237 982 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-207ENST00000396581 TBCAO75347 108 aaKnown RBP14.36□□□□□ -0.11
TRIM40-207ENST00000396581 OAS1P00973 400 aaKnown RBP14.36□□□□□ -0.11
TRIM40-207ENST00000396581 FAM86B2P0C5J1 330 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 PLTPP55058 493 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 RINT1Q6NUQ1 792 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 SIAH1Q8IUQ4 282 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 LRRC34Q8IZ02 419 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 DCAF4Q8WV16 495 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 FIZ1Q96SL8 496 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms