RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 KCNA1Q09470 495 aa23.66■■□□□ 1.38
VDAC1-203ENST00000395047 STRN3Q13033 797 aa23.66■■□□□ 1.38
VDAC1-203ENST00000395047 NFKBIBQ15653 356 aa23.66■■□□□ 1.38
VDAC1-203ENST00000395047 CCDC47Q96A33 483 aaKnown RBP23.66■■□□□ 1.38
VDAC1-203ENST00000395047 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.66■■□□□ 1.382e-11■■■■□ 24
VDAC1-203ENST00000395047 IKZF4Q9H2S9 585 aa23.66■■□□□ 1.38
VDAC1-203ENST00000395047 PRMT7Q9NVM4 692 aaPredicted RBP23.66■■□□□ 1.38
VDAC1-203ENST00000395047 MGEA5O60502 916 aa23.65■■□□□ 1.38
VDAC1-203ENST00000395047 PRPF6O94906 941 aaKnown RBP23.65■■□□□ 1.38
VDAC1-203ENST00000395047 STK4Q13043 487 aa23.65■■□□□ 1.38
VDAC1-203ENST00000395047 PRPF4BQ13523 1007 aaKnown RBP23.65■■□□□ 1.38
VDAC1-203ENST00000395047 AMHR2Q16671 573 aa23.65■■□□□ 1.38
VDAC1-203ENST00000395047 FZD8Q9H461 694 aa23.65■■□□□ 1.38
VDAC1-203ENST00000395047 TBX20Q9UMR3 447 aa23.65■■□□□ 1.38
VDAC1-203ENST00000395047 ARF4P18085 180 aaPredicted RBP23.64■■□□□ 1.38
VDAC1-203ENST00000395047 EHHADHQ08426 723 aa23.64■■□□□ 1.38
VDAC1-203ENST00000395047 CNKSR3Q6P9H4 555 aa23.64■■□□□ 1.38
VDAC1-203ENST00000395047 SMYD4Q8IYR2 804 aaPredicted RBP23.64■■□□□ 1.38
VDAC1-203ENST00000395047 BICD1Q96G01 975 aa23.64■■□□□ 1.38
VDAC1-203ENST00000395047 TMEM134Q9H6X4 195 aa23.64■■□□□ 1.38
VDAC1-203ENST00000395047 MAPK8IP1Q9UQF2 711 aa23.64■■□□□ 1.38
VDAC1-203ENST00000395047 GDAQ9Y2T3 454 aa23.64■■□□□ 1.38
VDAC1-203ENST00000395047 ZBBXA8MT70 800 aa23.64■■□□□ 1.37
VDAC1-203ENST00000395047 FGBP02675 491 aa23.64■■□□□ 1.37
VDAC1-203ENST00000395047 ZSCAN20P17040 1043 aaPredicted RBP23.64■■□□□ 1.37
VDAC1-203ENST00000395047 CAVIN1Q6NZI2 390 aaKnown RBP23.64■■□□□ 1.37
VDAC1-203ENST00000395047 ELOA2Q8IYF1 753 aaPredicted RBP23.64■■□□□ 1.37
VDAC1-203ENST00000395047 ADAM2Q99965 735 aa23.64■■□□□ 1.37
VDAC1-203ENST00000395047 TARS2Q9BW92 718 aaKnown RBP23.64■■□□□ 1.37
VDAC1-203ENST00000395047 AGPAT5Q9NUQ2 364 aa23.64■■□□□ 1.37
VDAC1-203ENST00000395047 H0YCG3 227 aa23.63■■□□□ 1.37
VDAC1-203ENST00000395047 ACKR2O00590 384 aa23.63■■□□□ 1.37
VDAC1-203ENST00000395047 HOXA11P31270 313 aaPredicted RBP23.63■■□□□ 1.37
VDAC1-203ENST00000395047 GTF2BQ00403 316 aa23.63■■□□□ 1.37
VDAC1-203ENST00000395047 IKBKEQ14164 716 aa23.63■■□□□ 1.37
VDAC1-203ENST00000395047 TMEM240Q5SV17 173 aa23.63■■□□□ 1.37
VDAC1-203ENST00000395047 TWF2Q6IBS0 349 aaKnown RBP23.63■■□□□ 1.37
VDAC1-203ENST00000395047 NELFCDQ8IXH7 590 aa23.63■■□□□ 1.37
VDAC1-203ENST00000395047 KIAA0895Q8NCT3 520 aa23.63■■□□□ 1.37
VDAC1-203ENST00000395047 UBE2OQ9C0C9 1292 aaKnown RBP23.63■■□□□ 1.37
VDAC1-203ENST00000395047 RHOBTB3O94955 611 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 PFKMP08237 780 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 NCBP1Q09161 790 aaKnown RBP23.62■■□□□ 1.37
VDAC1-203ENST00000395047 NT5DC1Q5TFE4 455 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 RTN4RL1Q86UN2 441 aaPredicted RBP23.62■■□□□ 1.37
VDAC1-203ENST00000395047 APBB2Q92870 758 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 GSDMAQ96QA5 445 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 KIAA1468Q9P260 1216 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 MAN1B1Q9UKM7 699 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 C9orf50Q5SZB4 431 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 SLC17A8Q8NDX2 589 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 SPATA20Q8TB22 786 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 LINC01599Q8WXQ3 324 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 PRIMPOLQ96LW4 560 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 TMEM63CQ9P1W3 806 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 PCDHB13Q9Y5F0 798 aa23.62■■□□□ 1.37
VDAC1-203ENST00000395047 TISP43B9A030 160 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 PPP1R37O75864 691 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 ACTN1P12814 892 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 SARSP49591 514 aaKnown RBP23.61■■□□□ 1.37
VDAC1-203ENST00000395047 KCNB1Q14721 858 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 FAM187BQ17R55 369 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 PSRC1Q6PGN9 363 aaPredicted RBP23.61■■□□□ 1.37
VDAC1-203ENST00000395047 PPP4R3CPQ6ZMV5 832 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.61■■□□□ 1.371e-7■■■■□ 24.4
VDAC1-203ENST00000395047 SYCP3Q8IZU3 236 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 MRPL4Q9BYD3 311 aaKnown RBP23.61■■□□□ 1.37
VDAC1-203ENST00000395047 RMND1Q9NWS8 449 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 ANKFY1Q9P2R3 1169 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 CNTNAP2Q9UHC6 1331 aa23.61■■□□□ 1.37
VDAC1-203ENST00000395047 HNRNPDLO14979 420 aaKnown RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 PTMSP20962 102 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 PSMD2Q13200 908 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 ATF7IP2Q5U623 682 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 TMCO2Q7Z6W1 182 aaPredicted RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 ZBTB33Q86T24 672 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 SCFD1Q8WVM8 642 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 ZBTB45Q96K62 511 aaPredicted RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 GDF15Q99988 308 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 STRA6Q9BX79 667 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 FTHL17Q9BXU8 183 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 EIF2AQ9BY44 585 aaKnown RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 ST6GALNAC4Q9H4F1 302 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 CXXC1Q9P0U4 656 aaPredicted RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 ENPP3O14638 875 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 HARSP12081 509 aaKnown RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 MATR3P43243 847 aaKnown RBP eCLIP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 LIG4P49917 911 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 L1TD1Q5T7N2 865 aaKnown RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 EEF1DP3Q658K8 133 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 NOTUMQ6P988 496 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 STXBP4Q6ZWJ1 553 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 ACO2Q99798 780 aaKnown RBP23.6■■□□□ 1.37
VDAC1-203ENST00000395047 TCHPQ9BT92 498 aa23.6■■□□□ 1.37
VDAC1-203ENST00000395047 PTPRSQ13332 1948 aa23.59■■□□□ 1.37
VDAC1-203ENST00000395047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.59■■□□□ 1.37
VDAC1-203ENST00000395047 PCBP1Q15365 356 aaKnown RBP eCLIP23.59■■□□□ 1.37
VDAC1-203ENST00000395047 SHHQ15465 462 aa23.59■■□□□ 1.37
VDAC1-203ENST00000395047 CHRDL2Q6WN34 429 aa23.59■■□□□ 1.37
VDAC1-203ENST00000395047 MAP4K3Q8IVH8 894 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms