RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RSAD1Q9HA92 442 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 DDX25Q9UHL0 483 aaKnown RBP23.66■■□□□ 1.38
TRAF4-203ENST00000394925 FAN1Q9Y2M0 1017 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 WDR87Q6ZQQ6 2873 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 M0R2N6 131 aa23.65■■□□□ 1.38
TRAF4-203ENST00000394925 SRGAP2CP0DJJ0 459 aa23.65■■□□□ 1.38
TRAF4-203ENST00000394925 CWF19L1Q69YN2 538 aaKnown RBP23.65■■□□□ 1.38
TRAF4-203ENST00000394925 MOXD1Q6UVY6 613 aa23.65■■□□□ 1.38
TRAF4-203ENST00000394925 MRPL10Q7Z7H8 261 aaKnown RBP23.65■■□□□ 1.38
TRAF4-203ENST00000394925 ZNF579Q8NAF0 562 aaKnown RBP23.65■■□□□ 1.38
TRAF4-203ENST00000394925 STK39Q9UEW8 545 aa23.65■■□□□ 1.38
TRAF4-203ENST00000394925 SLC37A4O43826 429 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 LILRB3O75022 631 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 POMCP01189 267 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 QARSP47897 775 aaKnown RBP23.64■■□□□ 1.37
TRAF4-203ENST00000394925 TDGQ13569 410 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 NONOQ15233 471 aaKnown RBP eCLIP23.64■■□□□ 1.372e-7■■□□□ 12.9
TRAF4-203ENST00000394925 INF2Q27J81 1249 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 FRMD5Q7Z6J6 570 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 PRPF31Q8WWY3 499 aaKnown RBP23.64■■□□□ 1.37
TRAF4-203ENST00000394925 SLC7A3Q8WY07 619 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 TMEM143Q96AN5 459 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 TMEM175Q9BSA9 504 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 SLKQ9H2G2 1235 aaPredicted RBP23.64■■□□□ 1.37
TRAF4-203ENST00000394925 MINDY3Q9H8M7 445 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 MRPL17Q9NRX2 175 aaKnown RBP23.64■■□□□ 1.37
TRAF4-203ENST00000394925 KANSL3Q9P2N6 904 aa23.64■■□□□ 1.37
TRAF4-203ENST00000394925 CNTNAP2Q9UHC6 1331 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 C2CD2LO14523 706 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 NRP1O14786 923 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 CPLX1O14810 134 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 DEXIO95424 95 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 TOB2Q14106 344 aaPredicted RBP23.63■■□□□ 1.37
TRAF4-203ENST00000394925 NPY5RQ15761 445 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 UBXN11Q5T124 520 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 SRGAP1Q7Z6B7 1085 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 DAGLBQ8NCG7 672 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 CEP170P1Q96L14 293 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 AIFM3Q96NN9 605 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 KCNK12Q9HB15 430 aa23.63■■□□□ 1.37
TRAF4-203ENST00000394925 BMP2KQ9NSY1 1161 aaPredicted RBP23.63■■□□□ 1.37
TRAF4-203ENST00000394925 PI15O43692 258 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 HOXA11P31270 313 aaPredicted RBP23.62■■□□□ 1.37
TRAF4-203ENST00000394925 AK2P54819 239 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 LAMTOR4Q0VGL1 99 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 LETM2Q2VYF4 491 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 C15orf39Q6ZRI6 1047 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 PSPC1Q8WXF1 523 aaKnown RBP23.62■■□□□ 1.37
TRAF4-203ENST00000394925 LARP6Q9BRS8 491 aaKnown RBP23.62■■□□□ 1.37
TRAF4-203ENST00000394925 WRAP73Q9P2S5 460 aaPredicted RBP23.62■■□□□ 1.37
TRAF4-203ENST00000394925 FBXL21Q9UKT6 434 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 VAV3Q9UKW4 847 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 DUSP12Q9UNI6 340 aa23.62■■□□□ 1.37
TRAF4-203ENST00000394925 PRG3Q9Y2Y8 225 aaPredicted RBP23.62■■□□□ 1.37
TRAF4-203ENST00000394925 DKC1O60832 514 aaKnown RBP eCLIP23.61■■□□□ 1.37
TRAF4-203ENST00000394925 URODP06132 367 aa23.61■■□□□ 1.37
TRAF4-203ENST00000394925 NPR3P17342 541 aa23.61■■□□□ 1.37
TRAF4-203ENST00000394925 AOC1P19801 751 aa23.61■■□□□ 1.37
TRAF4-203ENST00000394925 PPP2R5CQ13362 524 aa23.61■■□□□ 1.37
TRAF4-203ENST00000394925 RUFY3Q7L099 469 aa23.61■■□□□ 1.37
TRAF4-203ENST00000394925 KRT25Q7Z3Z0 450 aa23.61■■□□□ 1.37
TRAF4-203ENST00000394925 NKD2Q969F2 451 aaPredicted RBP23.61■■□□□ 1.37
TRAF4-203ENST00000394925 DHX33Q9H6R0 707 aaKnown RBP23.61■■□□□ 1.37
TRAF4-203ENST00000394925 MAN1C1Q9NR34 630 aa23.61■■□□□ 1.37
TRAF4-203ENST00000394925 SOD2P04179 222 aa23.6■■□□□ 1.37
TRAF4-203ENST00000394925 P4HBP07237 508 aaKnown RBP23.6■■□□□ 1.37
TRAF4-203ENST00000394925 MYBP10242 640 aa23.6■■□□□ 1.37
TRAF4-203ENST00000394925 GALNT17Q6IS24 598 aa23.6■■□□□ 1.37
TRAF4-203ENST00000394925 TAS1R1Q7RTX1 841 aa23.6■■□□□ 1.37
TRAF4-203ENST00000394925 EXOC8Q8IYI6 725 aa23.6■■□□□ 1.37
TRAF4-203ENST00000394925 SIX5Q8N196 739 aa23.6■■□□□ 1.37
TRAF4-203ENST00000394925 KCNJ14Q9UNX9 436 aa23.6■■□□□ 1.37
TRAF4-203ENST00000394925 GVINP1Q7Z2Y8 2422 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 CCDC195A0A1B0GUA6 201 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 ITGA4P13612 1032 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 NCLP19338 710 aaKnown RBP23.59■■□□□ 1.37
TRAF4-203ENST00000394925 RFC5P40937 340 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 OR1G1P47890 313 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 STK3Q13188 491 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 RNF149Q8NC42 400 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 SMG8Q8ND04 991 aaKnown RBP23.59■■□□□ 1.37
TRAF4-203ENST00000394925 FAM20AQ96MK3 541 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 RPS6KC1Q96S38 1066 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 HERC2P3Q9BVR0 1158 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 KCNMB3Q9NPA1 279 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 MARCH5Q9NX47 278 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 IGSF9Q9P2J2 1179 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 PPME1Q9Y570 386 aa23.59■■□□□ 1.37
TRAF4-203ENST00000394925 TEX28O15482 410 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 NARSO43776 548 aaKnown RBP23.58■■□□□ 1.37
TRAF4-203ENST00000394925 N4BP1O75113 896 aaKnown RBP23.58■■□□□ 1.37
TRAF4-203ENST00000394925 REC8O95072 547 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 ADH1AP07327 375 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 GBP2P32456 591 aaPredicted RBP23.58■■□□□ 1.37
TRAF4-203ENST00000394925 CPLX2Q6PUV4 134 aaKnown RBP23.58■■□□□ 1.37
TRAF4-203ENST00000394925 CCDC105Q8IYK2 499 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 COLGALT2Q8IYK4 626 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 CNNM3Q8NE01 707 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 CMASQ8NFW8 434 aaPredicted RBP23.58■■□□□ 1.37
TRAF4-203ENST00000394925 ZNF274Q96GC6 653 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms