RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PABPC3Q9H361 631 aaKnown RBP17.32■□□□□ 0.36
PCDH1-203ENST00000394536 FGFR1OP2Q9NVK5 253 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 TRAF3IP3Q9Y228 551 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 NR2E1Q9Y466 385 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 SHBGP04278 402 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 CD19P15391 556 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 SESN3P58005 492 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 MAPK7Q13164 816 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 ZNF449Q6P9G9 518 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 DHX34Q14147 1143 aaKnown RBP17.31■□□□□ 0.36
PCDH1-203ENST00000394536 ASTE1Q2TB18 679 aaPredicted RBP17.31■□□□□ 0.36
PCDH1-203ENST00000394536 HAUS6Q7Z4H7 955 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 ATG4AQ8WYN0 398 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 KRT35Q92764 455 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 FBXO28Q9NVF7 368 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 ANKFY1Q9P2R3 1169 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 LCA5LO95447 670 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 MMP10P09238 476 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 KRT17Q04695 432 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 CEP170P1Q96L14 293 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 IWS1Q96ST2 819 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 LBHD1Q9BQE6 289 aaPredicted RBP17.31■□□□□ 0.36
PCDH1-203ENST00000394536 CBWD1Q9BRT8 395 aa17.31■□□□□ 0.36
PCDH1-203ENST00000394536 DYNLT1P63172 113 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 DIS3Q9Y2L1 958 aaKnown RBP17.3■□□□□ 0.36
PCDH1-203ENST00000394536 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 GBP1P32455 592 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 SCTRP47872 440 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 LIG4P49917 911 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 QPCTQ16769 361 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 ZCWPW2Q504Y3 356 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 ZNF394Q53GI3 561 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 C11orf70Q9BRQ4 267 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 CXorf56Q9H5V9 222 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.3■□□□□ 0.36
PCDH1-203ENST00000394536 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 PHF2O75151 1096 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 SGPL1O95470 568 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 ACER1Q8TDN7 264 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 VCPKMTQ9H867 229 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 KLHL11Q9NVR0 708 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 NYAP2Q9P242 653 aa17.3■□□□□ 0.36
PCDH1-203ENST00000394536 TBX3O15119 743 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 SPAG7O75391 227 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 PDE6BP35913 854 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 STRN3Q13033 797 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 KCNV2Q8TDN2 545 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 KAT5Q92993 513 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 SGSM3Q96HU1 749 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 PPP1R12CQ9BZL4 782 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 GPRC5CQ9NQ84 441 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 PCDHB4Q9Y5E5 795 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 EXOC1LA0A1B0GW35 172 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 CCT8L1PA6NM43 557 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 RASA4BC9J798 803 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 GOLGA8SH3BPF8 625 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 GOLGA8MH3BSY2 632 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 RASA4O43374 803 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 ARP10275 920 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 IL1R1P14778 569 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 MARCKSL1P49006 195 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 ARHGEF16Q5VV41 709 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 SP8Q8IXZ3 490 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 SCFD2Q8WU76 684 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
PCDH1-203ENST00000394536 N4BP2Q86UW6 1770 aaPredicted RBP17.29■□□□□ 0.36
PCDH1-203ENST00000394536 NPEPPSP55786 919 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 GRK7Q8WTQ7 553 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 CPA5Q8WXQ8 436 aa17.29■□□□□ 0.36
PCDH1-203ENST00000394536 LRRIQ4A6NIV6 560 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 MEIS2O14770 477 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 MXRA7P84157 204 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.28■□□□□ 0.36
PCDH1-203ENST00000394536 LNX1Q8TBB1 728 aaPredicted RBP17.28■□□□□ 0.36
PCDH1-203ENST00000394536 HSPBP1Q9NZL4 362 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 SEL1LQ9UBV2 794 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 TMEM120BA0PK00 339 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 PI4K2BG5E9Z4 385 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 TRAPPC3O43617 180 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 CA4P22748 312 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 CERS5Q8N5B7 392 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 MAIP1Q8WWC4 291 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 FAM213AQ9BRX8 229 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 TRPC6Q9Y210 931 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 DENND3A2RUS2 1198 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 H0Y3Z8 333 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 RTN2O75298 545 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 IL9RQ01113 521 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 COBLL1Q53SF7 1204 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 ZNF720Q7Z2F6 126 aa17.28■□□□□ 0.36
PCDH1-203ENST00000394536 TMEM150BA6NC51 233 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 SPATA31C1P0DKV0 1188 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 SCP2P22307 547 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 AOC3Q16853 763 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms