RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 LCA5LO95447 670 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 GGPS1O95749 300 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 CYP2C8P10632 490 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 FERP16591 822 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 PLA2G4AP47712 749 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 OAZ1P54368 228 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 GALCP54803 685 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 GTF2BQ00403 316 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 TMEM132AQ24JP5 1023 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 EPC2Q52LR7 807 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 ZBTB45Q96K62 511 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 ATP6V0A4Q9HBG4 840 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 TXNRD2Q9NNW7 524 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 DGAT1O75907 488 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 ZRANB2O95218 330 aaKnown RBP eCLIP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 KRT5P13647 590 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 SSTR3P32745 418 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 DMTNQ08495 405 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 BIRC3Q13489 604 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 RPS6KA1Q15418 735 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 DPY19L2P1Q6NXN4 242 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 TMEM117Q9H0C3 514 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 XPNPEP1Q9NQW7 623 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 ADAMTS5Q9UNA0 930 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 ESYT3A0FGR9 886 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 CYP26A1O43174 497 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 TCP1P17987 556 aaKnown RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 BRD3Q15059 726 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 PEX26Q7Z412 305 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 DEPTORQ8TB45 409 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 OPTNQ96CV9 577 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 CDCA5Q96FF9 252 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 PDE11AQ9HCR9 933 aa12.07□□□□□ -0.48
TCOF1-203ENST00000394269 DMGDHQ9UI17 866 aaKnown RBP12.07□□□□□ -0.48
TCOF1-203ENST00000394269 GRID2IPA4D2P6 1211 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 LYPLA2O95372 231 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 SUPT20HL2P0C7V6 817 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 IGBP1P78318 339 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 STRN3Q13033 797 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 EMC2Q15006 297 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 NAA35Q5VZE5 725 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 ZNF771Q7L3S4 317 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 CDR2LQ86X02 465 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 RNF10Q8N5U6 811 aaKnown RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 TAS1R2Q8TE23 839 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 CTNNBL1Q8WYA6 563 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 DHX38Q92620 1227 aaKnown RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 KIFAP3Q92845 792 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 IWS1Q96ST2 819 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 AP1M1Q9BXS5 423 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 RBM12Q9NTZ6 932 aaKnown RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 PFASO15067 1338 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 K7ERI5 159 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 UBA1P22314 1058 aaKnown RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 HTRA3P83110 453 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 CFAP221Q4G0U5 840 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 XKR3Q5GH77 459 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 ZNF662Q6ZS27 426 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 ZBTB33Q86T24 672 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 LRRC71Q8N4P6 559 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 LNX1Q8TBB1 728 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-203ENST00000394269 COPS5Q92905 334 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 FNBP1Q96RU3 617 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 STRA6Q9BX79 667 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 FUT8Q9BYC5 575 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
TCOF1-203ENST00000394269 SOWAHBA6NEL2 793 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 PJA2O43164 708 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 STAT5BP51692 787 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 DRP2Q13474 957 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 KCTD2Q14681 263 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 BEND6Q5SZJ8 279 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-203ENST00000394269 GJC2Q5T442 439 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-203ENST00000394269 FBXO16Q8IX29 292 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-203ENST00000394269 ANKRD13AQ8IZ07 590 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 METTL13Q8N6R0 699 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 CHST13Q8NET6 341 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 SEMA4DQ92854 862 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 TARS2Q9BW92 718 aaKnown RBP12.05□□□□□ -0.48
TCOF1-203ENST00000394269 AZI2Q9H6S1 392 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 MKI67P46013 3256 aaKnown RBP12.05□□□□□ -0.48
TCOF1-203ENST00000394269 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-203ENST00000394269 DKC1O60832 514 aaKnown RBP eCLIP12.05□□□□□ -0.48
TCOF1-203ENST00000394269 SGPL1O95470 568 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 ATP4AP20648 1035 aa12.05□□□□□ -0.48
TCOF1-203ENST00000394269 OAS2P29728 719 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms