RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 C4orf19Q8IY42 314 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 AFAP1L1Q8TED9 768 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 ELMO3Q96BJ8 720 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 HSD17B14Q9BPX1 270 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 AP1M1Q9BXS5 423 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 LACRTQ9GZZ8 138 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 GOLPH3Q9H4A6 298 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 APEX2Q9UBZ4 518 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 UTP11Q9Y3A2 253 aaKnown RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 ANKRD36CQ5JPF3 1778 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 GOLGA6CA6NDK9 693 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 ZNF185O15231 689 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 SUPT20HL2P0C7V6 817 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 GOLGA6DP0CG33 693 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 COPB2P35606 906 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 DMTNQ08495 405 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 ARSHQ5FYA8 562 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 KLHDC7AQ5VTJ3 777 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 TRIM59Q8IWR1 403 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 POP1Q99575 1024 aaKnown RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 MRPL4Q9BYD3 311 aaKnown RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 GBA2Q9HCG7 927 aaPredicted RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 GOLGA6AQ9NYA3 693 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 TNPO2O14787 897 aaKnown RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 MAPK4P31152 587 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 IRF2BP1Q8IU81 584 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 WNK4Q96J92 1243 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 MED15Q96RN5 788 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 L2HGDHQ9H9P8 463 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 RRAGCQ9HB90 399 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 OLFML3Q9NRN5 406 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 FAN1Q9Y2M0 1017 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 A0A0U1RQJ8 604 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 LRRC10BA6NIK2 292 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 FTLP02792 175 aaPredicted RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 ATF7P17544 494 aaPredicted RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 TBX2Q13207 712 aaPredicted RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
ERCC2-204ENST00000391945 C7orf31Q8N865 590 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 KIAA1586Q9HCI6 787 aa13.81□□□□□ -0.2
ERCC2-204ENST00000391945 PAPPAQ13219 1627 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 FZD9O00144 591 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 CXCL11O14625 94 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 PRKCBP05771 671 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 PHKA2P46019 1235 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 KIF22Q14807 665 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 SLC18A3Q16572 532 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 C1orf186Q6ZWK4 172 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 KCTD17Q8N5Z5 321 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
ERCC2-204ENST00000391945 VAV3Q9UKW4 847 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 A0A087X0T9 212 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 FAM228BP0C875 321 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 PON1P27169 355 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 ABCD1P33897 745 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 YWHAEP62258 255 aaKnown RBP13.8□□□□□ -0.2
ERCC2-204ENST00000391945 KAZNQ674X7 775 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 SMARCAD1Q9H4L7 1026 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 CNTNAP1P78357 1384 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 GUCY2CP25092 1073 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 CLCN3P51790 818 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 PPATQ06203 517 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 CASP8Q14790 479 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 CCDC60Q8IWA6 550 aaPredicted RBP13.8□□□□□ -0.2
ERCC2-204ENST00000391945 HSD3B7Q9H2F3 369 aa13.8□□□□□ -0.2
ERCC2-204ENST00000391945 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
ERCC2-204ENST00000391945 ATP2C2O75185 946 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 IFNB1P01574 187 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 ALDH5A1P51649 535 aaPredicted RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 MRPS9P82933 396 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 SCYL2Q6P3W7 929 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 RDM1Q8NG50 284 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 MKNK1Q9BUB5 465 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 ARHGAP20Q9P2F6 1191 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 MTRF1LQ9UGC7 380 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 CPA4Q9UI42 421 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 UBIAD1Q9Y5Z9 338 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 CASZ1Q86V15 1759 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 MYH7P12883 1935 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 TERF2Q15554 542 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 EFCAB12Q6NXP0 572 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 UPF1Q92900 1129 aaKnown RBP eCLIP13.79□□□□□ -0.23e-7■■■■□ 26.6
ERCC2-204ENST00000391945 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 IGSF9BQ9UPX0 1349 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 PDHXO00330 501 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 OAZ1P54368 228 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 SLC8A3P57103 927 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 VSNL1P62760 191 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms