RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 MIEF2Q96C03 454 aa2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 RPL10LQ96L21 214 aaKnown RBP2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 UBA5Q9GZZ9 404 aa2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLKQ9H2G2 1235 aaPredicted RBP2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 PTPRHQ9HD43 1115 aa2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 TCEAL9Q9UHQ7 104 aa2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 NOB1Q9ULX3 412 aaKnown RBP2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 PHLDB1Q86UU1 1377 aa2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 POLR2AP24928 1970 aaKnown RBP2.83□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM20BO75063 409 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 EFCAB14O75071 495 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 RPS6KA4O75676 772 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 WDHD1O75717 1129 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 RAPGEF3O95398 923 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 LMNAP02545 664 aaKnown RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 HNRNPLP14866 589 aaKnown RBP eCLIP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 BDNFP23560 247 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 PTX3P26022 381 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 SERPINB3P29508 390 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 KRTAP10-9P60411 292 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 PPP2R5AQ15172 486 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 MTERF2Q49AM1 385 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 TMEM177Q53S58 311 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 RABL3Q5HYI8 236 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 METRNLQ641Q3 311 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 ESRP1Q6NXG1 681 aaKnown RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 KLHDC10Q6PID8 442 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM111BQ6SJ93 734 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 BTNL9Q6UXG8 535 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 UNQ6494/PRO21346Q6UXR6 183 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 CCAR1Q8IX12 1150 aaKnown RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 NIM1KQ8IY84 436 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 ELOA2Q8IYF1 753 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 RTKN2Q8IZC4 609 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 ANKRD53Q8N9V6 530 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 OR5AN1Q8NGI8 311 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 NINJ1Q92982 152 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 TIFAQ96CG3 184 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLC7A6OSQ96CW6 309 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZG16BQ96DA0 208 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 CCDC136Q96JN2 1154 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 MNTQ99583 582 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 TARS2Q9BW92 718 aaKnown RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 CPEB1Q9BZB8 566 aaKnown RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 PITHD1Q9GZP4 211 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 PARPBPQ9NWS1 579 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 SYBUQ9NX95 663 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZIM2Q9NZV7 527 aa2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 COL3A1P02461 1466 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.19-201ENST00000390846 IFRD1O00458 451 aaPredicted RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 KIF3BO15066 747 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 MAFGO15525 162 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 PDE8AO60658 829 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 GLRX3O76003 335 aaKnown RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 TYRP1P17643 537 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 CNGA1P29973 690 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 MEOX1P50221 254 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 GUCY2FP51841 1108 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 TCIRG1Q13488 830 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 TMEM132BQ14DG7 1078 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 PCBP1Q15365 356 aaKnown RBP eCLIP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 TCEA2Q15560 299 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZNF568Q3ZCX4 644 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 CCDC184Q52MB2 194 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 CCSAPQ6IQ19 270 aaPredicted RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 ERAP2Q6P179 960 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 BRAPQ7Z569 592 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 SKAP1Q86WV1 359 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZC3H7AQ8IWR0 971 aaKnown RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM9BQ8IZU0 186 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 LILRA3Q8N6C8 439 aaPredicted RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 IGSF22Q8N9C0 903 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 MDGA1Q8NFP4 955 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZNF764Q96H86 408 aaPredicted RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 LSM14BQ9BX40 385 aaKnown RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 MTFR1LQ9H019 292 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 IL23AQ9NPF7 189 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 TAGLN3Q9UI15 199 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 INTUQ9ULD6 942 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 DENND2AQ9ULE3 1009 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 RBM8AQ9Y5S9 174 aaKnown RBP2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 TNKSO95271 1327 aa2.81□□□□□ -1.96
SNORA40.19-201ENST00000390846 CENPVL1A0A0U1RR11 272 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 A0A1W2PRX2 142 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLC12A8A0AV02 714 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 WNT10BO00744 389 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 GABRDO14764 452 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 RAMP2O60895 175 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 DNAJC8O75937 253 aaPredicted RBP2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 TOX4O94842 621 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 GCP02774 474 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 VSIG10L2P0DP72 767 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 ATF3P18847 181 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 BMP5P22003 454 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 ID4P47928 161 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 FNTBP49356 437 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 MAN2A2P49641 1150 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 NEK2P51955 445 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 EPHB1P54762 984 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms