RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 EPS15L1Q9UBC2 864 aa13.3□□□□□ -0.28
SOD1-202ENST00000389995 WDR64B1ANS9 1081 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 NRP1O14786 923 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 CDC27P30260 824 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 TARBP2Q15633 366 aaKnown RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 CREB3L3Q68CJ9 461 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 DCLRE1AQ6PJP8 1040 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 ZC3H14Q6PJT7 736 aaKnown RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 SYNE3Q6ZMZ3 975 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 GET4Q7L5D6 327 aaPredicted RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 CATSPER4Q7RTX7 472 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 SGMS1Q86VZ5 419 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 PALB2Q86YC2 1186 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 GLYCTKQ8IVS8 523 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 LENG9Q96B70 501 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 ZNF707Q96C28 371 aaPredicted RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 LSG1Q9H089 658 aaKnown RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 FAM217BQ9NTX9 383 aaPredicted RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 FAN1Q9Y2M0 1017 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
SOD1-202ENST00000389995 PCDHB2Q9Y5E7 798 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 ARID2Q68CP9 1835 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 FRYQ5TBA9 3013 aa13.29□□□□□ -0.28
SOD1-202ENST00000389995 CNOT1A5YKK6 2376 aaKnown RBP13.28□□□□□ -0.28
SOD1-202ENST00000389995 ZBTB43O43298 467 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 EDIL3O43854 480 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 ALDH2P05091 517 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOD1-202ENST00000389995 SETQ01105 290 aaPredicted RBP13.28□□□□□ -0.28
SOD1-202ENST00000389995 NONOQ15233 471 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOD1-202ENST00000389995 PHLDB3Q6NSJ2 640 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 CMASQ8NFW8 434 aaPredicted RBP13.28□□□□□ -0.28
SOD1-202ENST00000389995 PJA1Q8NG27 643 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 URGCPQ8TCY9 931 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 NLRP4Q96MN2 994 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 FAM193BQ96PV7 902 aaPredicted RBP13.28□□□□□ -0.28
SOD1-202ENST00000389995 RPS6KC1Q96S38 1066 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 TRAIPQ9BWF2 469 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 UNC45AQ9H3U1 944 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 PIDD1Q9HB75 910 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
SOD1-202ENST00000389995 SUCLA2Q9P2R7 463 aaPredicted RBP13.28□□□□□ -0.28
SOD1-202ENST00000389995 NCDNQ9UBB6 729 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 MTF2Q9Y483 593 aaPredicted RBP13.28□□□□□ -0.28
SOD1-202ENST00000389995 NUMBLQ9Y6R0 609 aa13.28□□□□□ -0.28
SOD1-202ENST00000389995 MSH4O15457 936 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 KINO60870 393 aaKnown RBP13.27□□□□□ -0.29
SOD1-202ENST00000389995 ZNF623O75123 536 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 STBD1O95210 358 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 GLUD1P00367 558 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 SOD2P04179 222 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 URODP06132 367 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 ADH1AP07327 375 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 SKIP12755 728 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 LAMP2P13473 410 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 ATXN1P54253 815 aaKnown RBP13.27□□□□□ -0.29
SOD1-202ENST00000389995 GPC5P78333 572 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 SNW1Q13573 536 aaKnown RBP13.27□□□□□ -0.29
SOD1-202ENST00000389995 HTR4Q13639 388 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 STAMQ92783 540 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 RSAD1Q9HA92 442 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.29
SOD1-202ENST00000389995 NAP1L2Q9ULW6 460 aaPredicted RBP13.27□□□□□ -0.29
SOD1-202ENST00000389995 VWA8A3KMH1 1905 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 TRIP11Q15643 1979 aa13.27□□□□□ -0.29
SOD1-202ENST00000389995 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 DCDC2BA2VCK2 349 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 GOLGA8AA7E2F4 631 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 GOLGA8BA8MQT2 603 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 hCG_1984214I3L0E3 225 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 GAS7O60861 476 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
SOD1-202ENST00000389995 CD72P21854 359 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
SOD1-202ENST00000389995 OR1G1P47890 313 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 CSTF1Q05048 431 aaKnown RBP13.26□□□□□ -0.29
SOD1-202ENST00000389995 AAMPQ13685 434 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
SOD1-202ENST00000389995 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
SOD1-202ENST00000389995 UBXN11Q5T124 520 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 KIAA0319Q5VV43 1072 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 PLA2G4FQ68DD2 849 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 REXO1Q8N1G1 1221 aaKnown RBP13.26□□□□□ -0.29
SOD1-202ENST00000389995 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
SOD1-202ENST00000389995 RABGGTAQ92696 567 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 FGF14Q92915 247 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 PGBD4Q96DM1 585 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 HERC2P3Q9BVR0 1158 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 NT5C3AQ9H0P0 336 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 GLT8D2Q9H1C3 349 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 MINDY3Q9H8M7 445 aa13.26□□□□□ -0.29
SOD1-202ENST00000389995 SDK1Q7Z5N4 2213 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 IGKV6-21A0A0C4DH24 114 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms