RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 RNF149Q8NC42 400 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 PPP1R14CQ8TAE6 165 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 RAB17Q9H0T7 212 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 STAT5BP51692 787 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 ACTR5Q9H9F9 607 aaPredicted RBP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 HOMER3Q9NSC5 361 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 RAB21Q9UL25 225 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 PHLPP1O60346 1717 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 PDE2AO00408 941 aaPredicted RBP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 SYF2O95926 243 aaKnown RBP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 PPP2R5DQ14738 602 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 POLR3FQ9H1D9 316 aaPredicted RBP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 PVALEFA0A1B0GWK0 134 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 ANO9A1A5B4 782 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 BAG2O95816 211 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 CYP2C8P10632 490 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 COPB2P35606 906 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 PSMD2Q13200 908 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 PDIA5Q14554 519 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 RBBP5Q15291 538 aaKnown RBP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 TSNAXIP1Q2TAA8 658 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 TRAPPC11Q7Z392 1133 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 CYFIP2Q96F07 1278 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 CAMKK2Q96RR4 588 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 GAKO14976 1311 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 WDR91A4D1P6 747 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 EGFRP00533 1210 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 ATF7P17544 494 aaPredicted RBP20.23■□□□□ 0.83
CSPG5-202ENST00000383738 PDE6CP51160 858 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 EPHA7Q15375 998 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 LIN9Q5TKA1 542 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
CSPG5-202ENST00000383738 DDX23Q9BUQ8 820 aaKnown RBP20.23■□□□□ 0.83
CSPG5-202ENST00000383738 IDI2Q9BXS1 227 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 CAPN11Q9UMQ6 739 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 RNF225M0QZC1 329 aaPredicted RBP20.23■□□□□ 0.83
CSPG5-202ENST00000383738 WHAMMQ8TF30 809 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 IQCGQ9H095 443 aaKnown RBP20.23■□□□□ 0.83
CSPG5-202ENST00000383738 TMEM206Q9H813 350 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 C19orf81C9J6K1 198 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 ZNF18P17022 549 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 PRPHP41219 470 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 JAK3P52333 1124 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 ELMO3Q96BJ8 720 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 RRAGCQ9HB90 399 aa20.23■□□□□ 0.83
CSPG5-202ENST00000383738 VIL1P09327 827 aaKnown RBP20.22■□□□□ 0.83
CSPG5-202ENST00000383738 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 C6orf163Q5TEZ5 329 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 XXYLT1Q8NBI6 393 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 TSEN2Q8NCE0 465 aaKnown RBP20.22■□□□□ 0.83
CSPG5-202ENST00000383738 MYCBPAPQ8TBZ2 947 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 ATP6V0A4Q9HBG4 840 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 ADARB2Q9NS39 739 aaKnown RBP20.22■□□□□ 0.83
CSPG5-202ENST00000383738 ZNF233A6NK53 670 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 POC1B-GALNT4F8VUJ3 575 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 THAP12O43422 761 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 EVI5O60447 810 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 SUN1O94901 812 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 ALKBH5Q6P6C2 394 aaKnown RBP20.22■□□□□ 0.83
CSPG5-202ENST00000383738 ZNF365Q70YC5 407 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 MXRA8Q9BRK3 442 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 DNAJC12Q9UKB3 198 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 INPP5FQ9Y2H2 1132 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 LRRD1A4D1F6 860 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 PPP2R2AP63151 447 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 GRB10Q13322 594 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 WDR93Q6P2C0 686 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 FASTKD5Q7L8L6 764 aaKnown RBP20.22■□□□□ 0.83
CSPG5-202ENST00000383738 ADSSL1Q8N142 457 aa20.22■□□□□ 0.83
CSPG5-202ENST00000383738 GUF1Q8N442 669 aaKnown RBP20.22■□□□□ 0.83
CSPG5-202ENST00000383738 FAM86B1E9PN63 330 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 FAM86B2P0C5J1 330 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 FAM153BP0C7A2 387 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 PTK2Q05397 1052 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 TTLL4Q14679 1199 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 FAM153CQ494X1 144 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 BSPRYQ5W0U4 402 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 FAM149B1Q96BN6 582 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 MAK16Q9BXY0 300 aaKnown RBP20.21■□□□□ 0.83
CSPG5-202ENST00000383738 CELF4Q9BZC1 486 aaKnown RBP20.21■□□□□ 0.83
CSPG5-202ENST00000383738 FAM153AQ9UHL3 310 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 TARSL2A2RTX5 802 aaKnown RBP20.21■□□□□ 0.83
CSPG5-202ENST00000383738 EYA4O95677 639 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 SLC8A3P57103 927 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 HERVK_113P62684 666 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 TFDP1Q14186 410 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 MAPK6Q16659 721 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 CYB5D1Q6P9G0 228 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 RFX8Q6ZV50 586 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 PSPC1Q8WXF1 523 aaKnown RBP20.21■□□□□ 0.83
CSPG5-202ENST00000383738 FAM114A2Q9NRY5 505 aa20.21■□□□□ 0.83
CSPG5-202ENST00000383738 GRIN3BO60391 1043 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 HHATQ5VTY9 493 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 CAPRIN2Q6IMN6 1127 aaKnown RBP20.2■□□□□ 0.82
CSPG5-202ENST00000383738 L3MBTL1Q9Y468 752 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 CTSHP09668 335 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 C6orf222P0C671 652 aaPredicted RBP20.2■□□□□ 0.82
CSPG5-202ENST00000383738 TBX2Q13207 712 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms