RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CASKIN2Q8WXE0 1202 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 ERP44Q9BS26 406 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 SUCLA2Q9P2R7 463 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 MAP2K7O14733 419 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 OPHN1O60890 802 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 CHN1P15882 459 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 HSD17B3P37058 310 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 SLC12A2P55011 1212 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 VGLL2Q8N8G2 317 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 LRRC37BQ96QE4 947 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 KIAA1586Q9HCI6 787 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 A6NJR5 290 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 SLC26A4O43511 780 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 CPP00450 1065 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 KRT17Q04695 432 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 SNF8Q96H20 258 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 SEC16BQ96JE7 1060 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 DUSP9Q99956 384 aaKnown RBP13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 ALG6Q9Y672 507 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 A0A0G2JND7 137 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 H0Y3Z8 333 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 PHF2O75151 1096 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 KRT76Q01546 638 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 ZC2HC1CQ53FD0 456 aaPredicted RBP13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 SCARA5Q6ZMJ2 495 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 ZBTB33Q86T24 672 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 RHOT1Q8IXI2 618 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 MTMR8Q96EF0 704 aa13.59□□□□□ -0.23
DNMT3A-204ENST00000380756 ATP5HO75947 161 aa13.58□□□□□ -0.23
DNMT3A-204ENST00000380756 SKIP12755 728 aa13.58□□□□□ -0.23
DNMT3A-204ENST00000380756 ARL4CP56559 192 aa13.58□□□□□ -0.23
DNMT3A-204ENST00000380756 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.23
DNMT3A-204ENST00000380756 TPCN2Q8NHX9 752 aa13.58□□□□□ -0.23
DNMT3A-204ENST00000380756 TTC25Q96NG3 672 aa13.58□□□□□ -0.23
DNMT3A-204ENST00000380756 CARD9Q9H257 536 aa13.58□□□□□ -0.23
DNMT3A-204ENST00000380756 A0A0U1RQJ8 604 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 PABPN1LA6NDY0 278 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 MED7O43513 233 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 SMIM24O75264 130 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 OSTNP61366 133 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 KDM7AQ6ZMT4 941 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 CATSPER3Q86XQ3 398 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 KIAA0895Q8NCT3 520 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 MKNK1Q9BUB5 465 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 TRIM55Q9BYV6 548 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 ZWILCHQ9H900 591 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 NYAP2Q9P242 653 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 TCP11X1B4DZS4 312 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 TLR3O15455 904 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 NOL3O60936 208 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 ZBTB7AO95365 584 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 SCP2P22307 547 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 PSMA2P25787 234 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 HSPA9P38646 679 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 TFDP1Q14186 410 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 NCAPG2Q86XI2 1143 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 SP8Q8IXZ3 490 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 SH2D3AQ9BRG2 576 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 PACSIN1Q9BY11 444 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 ANKRD26Q9UPS8 1709 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 SERPINB6P35237 376 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 IGBP1P78318 339 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 IZUMO3Q5VZ72 239 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 NME8Q8N427 588 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 MYCBPAPQ8TBZ2 947 aa13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 CCDC97Q96F63 343 aaPredicted RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 SPATS2LQ9NUQ6 558 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-204ENST00000380756 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 GJB7Q6PEY0 223 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 ENOSF1Q7L5Y1 443 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 TXNRD3Q86VQ6 643 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 TTC17Q96AE7 1141 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 PRMT1Q99873 361 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 SEPT10Q9P0V9 454 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 UVRAGQ9P2Y5 699 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 INTUQ9ULD6 942 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 CSADQ9Y600 493 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 CAPN9O14815 690 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 GLI1P08151 1106 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 MEA1Q16626 185 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 HDAC7Q8WUI4 952 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 FAM149B1Q96BN6 582 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 GOLGA8MH3BSY2 632 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 CLDN3O15551 220 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 TPD52P55327 224 aaPredicted RBP13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 PSMC5P62195 406 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 GPS1Q13098 491 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 R3HDM1Q15032 1099 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 NXNQ6DKJ4 435 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 SYT2Q8N9I0 419 aaPredicted RBP13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 ATL2Q8NHH9 583 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms