RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DLG4P78352 724 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 ARHGAP44Q17R89 818 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 EPC2Q52LR7 807 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 TPCN2Q8NHX9 752 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 IFT74Q96LB3 600 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 GPR88Q9GZN0 384 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 UBE2TQ9NPD8 197 aaPredicted RBP13.67□□□□□ -0.22
VPS16-202ENST00000380445 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 TISP43B9A030 160 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 KIF4AO95239 1232 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 SCP2P22307 547 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 GCLMP48507 274 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 ACTR2P61160 394 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 PPP3CAQ08209 521 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 SNRNP35Q16560 246 aaKnown RBP13.67□□□□□ -0.22
VPS16-202ENST00000380445 GLYCTKQ8IVS8 523 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 CTNNBL1Q8WYA6 563 aaPredicted RBP13.67□□□□□ -0.22
VPS16-202ENST00000380445 ATP6V0A4Q9HBG4 840 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 MED4Q9NPJ6 270 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 STIM2Q9P246 746 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 PFASO15067 1338 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 ZNF862O60290 1169 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 USP2O75604 605 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 HIRAP54198 1017 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 GALCP54803 685 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 ENPEPQ07075 957 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 XKR3Q5GH77 459 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 LNX1Q8TBB1 728 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 SYT11Q9BT88 431 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 SPON1Q9HCB6 807 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 ZCCHC17Q9NP64 241 aaKnown RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 IGSF9BQ9UPX0 1349 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 ICAM3P32942 547 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 PEX26Q7Z412 305 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 SLFN11Q7Z7L1 901 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 ANKRD35Q8N283 1001 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 MS4A14Q96JA4 679 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 RBM12Q9NTZ6 932 aaKnown RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 SEPT9Q9UHD8 586 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 SRCAPQ6ZRS2 3230 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 LRRIQ3A6PVS8 624 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 FOXN3O00409 490 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 KCNK3O14649 394 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 STBD1O95210 358 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 TNFRSF8P28908 595 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 TNNC1P63316 161 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 PRKCEQ02156 737 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 BRDTQ58F21 947 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 KRT39Q6A163 491 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 NLGN2Q8NFZ4 835 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 TMEM117Q9H0C3 514 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 PDLIM7Q9NR12 457 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 SUCLA2Q9P2R7 463 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 PACSIN2Q9UNF0 486 aaPredicted RBP13.66□□□□□ -0.22
VPS16-202ENST00000380445 CSADQ9Y600 493 aa13.66□□□□□ -0.22
VPS16-202ENST00000380445 NCANO14594 1321 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 KIAA1217Q5T5P2 1943 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 ANKRD62A6NC57 917 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 H3BQF6 201 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 ZMYND10O75800 440 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 SUPT20HL2P0C7V6 817 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 GTF2H1P32780 548 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 DNA2P51530 1060 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 C1orf220Q5T0J3 134 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 DAAM2Q86T65 1068 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
VPS16-202ENST00000380445 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 FAM71BQ8TC56 605 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 AGPAT1Q99943 283 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 TMCO5BA8MYB1 307 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 GARTP22102 1010 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 ADSSP30520 456 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 EPHB4P54760 987 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 MFAP3P55082 362 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 PRKG1Q13976 671 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 ACTRT1Q8TDG2 376 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 PARD3BQ8TEW8 1205 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 POMGNT1Q8WZA1 660 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 FBXL18Q96ME1 805 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 TMEM8AQ9HCN3 771 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 SEPT11Q9NVA2 429 aaKnown RBP13.65□□□□□ -0.22
VPS16-202ENST00000380445 EHD2Q9NZN4 543 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 DMGDHQ9UI17 866 aaKnown RBP13.65□□□□□ -0.22
VPS16-202ENST00000380445 AMFRQ9UKV5 643 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 SNCAIPQ9Y6H5 919 aa13.65□□□□□ -0.22
VPS16-202ENST00000380445 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 LRRN2O75325 713 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 SP4Q02446 784 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 VGLL4Q14135 290 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.64□□□□□ -0.23
VPS16-202ENST00000380445 KIAA1586Q9HCI6 787 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms