RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 PACS2Q86VP3 889 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.1■□□□□ 0.971e-16■■■■■ 250
SHROOM1-202ENST00000378676 LARSQ9P2J5 1176 aaKnown RBP21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 DAAM1Q9Y4D1 1078 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 GOLGA6L10A6NI86 522 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 MYZAPP0CAP1 466 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 MARCKSL1P49006 195 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 UGCGQ16739 394 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 TKFCQ3LXA3 575 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 FMNL3Q8IVF7 1028 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 ACCSQ96QU6 501 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 EPN3Q9H201 632 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 AGO4Q9HCK5 861 aaKnown RBP21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 FAM114A2Q9NRY5 505 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 HSPBP1Q9NZL4 362 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 ARID2Q68CP9 1835 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 MRPS9P82933 396 aaKnown RBP21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 RPUSD2Q8IZ73 545 aaKnown RBP21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 TMEM206Q9H813 350 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 YY1AP1Q9H869 796 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 GPRC5CQ9NQ84 441 aa21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 CHORDC1Q9UHD1 332 aaPredicted RBP21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 UTP11Q9Y3A2 253 aaKnown RBP21.09■□□□□ 0.97
SHROOM1-202ENST00000378676 ADRB2P07550 413 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 PLS3P13797 630 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 VCAM1P19320 739 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 SEC24CP53992 1094 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 DGKZQ13574 1117 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 TADA2BQ86TJ2 420 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 KRT35Q92764 455 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 DBR1Q9UK59 544 aaKnown RBP21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 DIS3Q9Y2L1 958 aaKnown RBP21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 ALG6Q9Y672 507 aa21.08■□□□□ 0.97
SHROOM1-202ENST00000378676 DOCK5Q9H7D0 1870 aa21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 FTLP02792 175 aaPredicted RBP21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 DHX9Q08211 1270 aaKnown RBP21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 C12orf56Q8IXR9 622 aa21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 PPM1EQ8WY54 764 aa21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 PCDHB18PQ96TA0 734 aa21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 CTTNBP2NLQ9P2B4 639 aa21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 SCAF8Q9UPN6 1271 aaKnown RBP21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 UBIAD1Q9Y5Z9 338 aa21.08■□□□□ 0.96
SHROOM1-202ENST00000378676 TMEM110-MUSTN1A8MSY1 372 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 MAPTP10636 758 aaKnown RBP21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 HADHBP55084 474 aaKnown RBP21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 DR1Q01658 176 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 MTMR3Q13615 1198 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 TRMT1LQ7Z2T5 733 aaKnown RBP21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 RHOT2Q8IXI1 618 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 XXYLT1Q8NBI6 393 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 GLG1Q92896 1179 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 ZNF341Q9BYN7 854 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 ACP6Q9NPH0 428 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 ASTN2O75129 1339 aaPredicted RBP21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 A0A087WUV0 522 aaPredicted RBP21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 GOLGA8IPA6NC78 632 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 GOLGA8JA6NMD2 632 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 BACH1O14867 736 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 ATMINO43313 823 aaPredicted RBP21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 TBC1D12O60347 775 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 SGPL1O95470 568 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 CHRNB2P17787 502 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 ALCAMQ13740 583 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 C11orf63Q6NUN7 778 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 HAUS6Q7Z4H7 955 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 ZNF473Q8WTR7 871 aaKnown RBP21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 FAM107BQ9H098 131 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 TMEM117Q9H0C3 514 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 HOMER2Q9NSB8 354 aa21.07■□□□□ 0.96
SHROOM1-202ENST00000378676 KIAA1217Q5T5P2 1943 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 PARP14Q460N5 1801 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 SLC16A4O15374 487 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 USP8P40818 1118 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 QARSP47897 775 aaKnown RBP21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 LIG3P49916 1009 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 DUPD1Q68J44 220 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 NOP9Q86U38 636 aaKnown RBP21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 CPNE8Q86YQ8 564 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 CPXCR1Q8N123 301 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 TXLNGYQ9BZA5 131 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 BCCIPQ9P287 314 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 PGAP2Q9UHJ9 254 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 SLC12A6Q9UHW9 1150 aa21.06■□□□□ 0.96
SHROOM1-202ENST00000378676 DCDC2CA8MYV0 355 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 ALAS1P13196 640 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 MXI1P50539 228 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 GTF2BQ00403 316 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 TNIP1Q15025 636 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 NIPA1Q7RTP0 329 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 NLRP14Q86W24 1093 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 OGFOD1Q8N543 542 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 MYCBPAPQ8TBZ2 947 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 EPS8L1Q8TE68 723 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 KREMEN1Q96MU8 473 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 FMO2Q99518 471 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 RAB17Q9H0T7 212 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 ZNF277Q9NRM2 450 aaPredicted RBP21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 ZDHHC18Q9NUE0 388 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 NOCTQ9UK39 431 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms