RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ALYREFQ86V81 257 aaKnown RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SLC7A3Q8WY07 619 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 CASP10Q92851 521 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 LPPQ93052 612 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 INO80BQ9C086 356 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 GBP3Q9H0R5 595 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 TMEM221A6NGB7 291 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 M0R296 226 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 DKC1O60832 514 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 PPP6R2O75170 966 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 POLGP54098 1239 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 BCAR1P56945 870 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 UBE2HP62256 183 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 TTC38Q5R3I4 469 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 MOXD1Q6UVY6 613 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 ZNF410Q86VK4 478 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SLC39A11Q8N1S5 342 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 PBXIP1Q96AQ6 731 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 FBXL18Q96ME1 805 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 CHST12Q9NRB3 414 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.28■□□□□ 0.04
PRPF18-202ENST00000378572 SPTLC2O15270 562 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 CCNT1O60563 726 aaKnown RBP15.28■□□□□ 0.04
PRPF18-202ENST00000378572 MBD3O95983 291 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 SKIP12755 728 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 ATF7P17544 494 aaPredicted RBP15.28■□□□□ 0.04
PRPF18-202ENST00000378572 PHKA2P46019 1235 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 CEBPZQ03701 1054 aaKnown RBP15.28■□□□□ 0.04
PRPF18-202ENST00000378572 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 NCAPH2Q6IBW4 605 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 TRIM67Q6ZTA4 783 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 NEK8Q86SG6 692 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 ZNF598Q86UK7 904 aaKnown RBP15.28■□□□□ 0.04
PRPF18-202ENST00000378572 CEP170P1Q96L14 293 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 PCDHB6Q9Y5E3 794 aa15.28■□□□□ 0.04
PRPF18-202ENST00000378572 MAFO75444 373 aaPredicted RBP15.27■□□□□ 0.04
PRPF18-202ENST00000378572 QARSP47897 775 aaKnown RBP15.27■□□□□ 0.04
PRPF18-202ENST00000378572 RAB27AP51159 221 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 NPEPPSP55786 919 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 ZXDAP98168 799 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 CES5AQ6NT32 575 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 ANO5Q75V66 913 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 URGCPQ8TCY9 931 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 CYP26B1Q9NR63 512 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 FAM105AQ9NUU6 356 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 COL4A3BPQ9Y5P4 624 aa15.27■□□□□ 0.04
PRPF18-202ENST00000378572 EML1O00423 815 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 CXCL14O95715 111 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 SRGAP2CP0DJJ0 459 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 GCFC2P16383 781 aaKnown RBP15.26■□□□□ 0.03
PRPF18-202ENST00000378572 HOXB8P17481 243 aaPredicted RBP15.26■□□□□ 0.03
PRPF18-202ENST00000378572 NOMO2Q5JPE7 1267 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 VPS52Q8N1B4 723 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 PSPC1Q8WXF1 523 aaKnown RBP15.26■□□□□ 0.03
PRPF18-202ENST00000378572 AUTS2Q8WXX7 1259 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 SUSD6Q92537 303 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 PGBD4Q96DM1 585 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 MBOAT7Q96N66 472 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 NAP1L4Q99733 375 aaKnown RBP15.26■□□□□ 0.03
PRPF18-202ENST00000378572 HCFC2Q9Y5Z7 792 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 IGKV6-21A0A0C4DH24 114 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 C2orf71A6NGG8 1288 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 STBD1O95210 358 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 NHLH1Q02575 133 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 PPP2R5CQ13362 524 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 KLHL40Q2TBA0 621 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 SYCE2Q6PIF2 218 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 B3GNT9Q6UX72 402 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 MRPL43Q8N983 215 aaKnown RBP15.26■□□□□ 0.03
PRPF18-202ENST00000378572 TMEM143Q96AN5 459 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 FAM20AQ96MK3 541 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 CCDC43Q96MW1 224 aaKnown RBP15.26■□□□□ 0.03
PRPF18-202ENST00000378572 FAM193BQ96PV7 902 aaPredicted RBP15.26■□□□□ 0.03
PRPF18-202ENST00000378572 LXNQ9BS40 222 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 KCNH6Q9H252 994 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 TBC1D13Q9NVG8 400 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 CDH22Q9UJ99 828 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 VAV3Q9UKW4 847 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 NR2E1Q9Y466 385 aa15.26■□□□□ 0.03
PRPF18-202ENST00000378572 TRAK2O60296 914 aa15.25■□□□□ 0.03
PRPF18-202ENST00000378572 CLASP2O75122 1294 aaKnown RBP15.25■□□□□ 0.03
PRPF18-202ENST00000378572 GADD45BO75293 160 aaPredicted RBP15.25■□□□□ 0.03
PRPF18-202ENST00000378572 P4HBP07237 508 aaKnown RBP15.25■□□□□ 0.03
PRPF18-202ENST00000378572 CYP4A11Q02928 519 aa15.25■□□□□ 0.03
PRPF18-202ENST00000378572 NBR1Q14596 966 aa15.25■□□□□ 0.03
PRPF18-202ENST00000378572 RARS2Q5T160 578 aaKnown RBP15.25■□□□□ 0.03
PRPF18-202ENST00000378572 ADALQ6DHV7 355 aa15.25■□□□□ 0.03
PRPF18-202ENST00000378572 TMEM184AQ6ZMB5 413 aa15.25■□□□□ 0.03
PRPF18-202ENST00000378572 EXOC8Q8IYI6 725 aa15.25■□□□□ 0.03
PRPF18-202ENST00000378572 CEP89Q96ST8 783 aa15.25■□□□□ 0.03
PRPF18-202ENST00000378572 TECTAO75443 2155 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 A0A1W2PQ27 194 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 A0A1W2PQ64 194 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 A0A1W2PQD8 194 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 MEIS3P2A8K0S8 358 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms