RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SMNDC1O75940 238 aaKnown RBP eCLIP17.77■□□□□ 0.43
TRIM39-201ENST00000376656 GJB6O95452 261 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 GH1P01241 217 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 GBP1P32455 592 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 ASRGL1Q7L266 308 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 CPNE8Q86YQ8 564 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 UBL4BQ8N7F7 174 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.43
TRIM39-201ENST00000376656 MICAL1Q8TDZ2 1067 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.43
TRIM39-201ENST00000376656 CDC42EP4Q9H3Q1 356 aaKnown RBP17.77■□□□□ 0.43
TRIM39-201ENST00000376656 ARHGEF10LQ9HCE6 1279 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 KCNK9Q9NPC2 374 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 ARL2BPQ9Y2Y0 163 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 RPA1P27694 616 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 NMT1P30419 496 aaKnown RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 PSMC2P35998 433 aaKnown RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 IRX1P78414 480 aaPredicted RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 DDB1Q16531 1140 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 ZC2HC1CQ53FD0 456 aaPredicted RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 CDCA2Q69YH5 1023 aaPredicted RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 SLFN12Q8IYM2 578 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 GBP7Q8N8V2 638 aaPredicted RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 ETNPPLQ8TBG4 499 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 SETDB2Q96T68 719 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 NYXQ9GZU5 481 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 INTS2Q9H0H0 1204 aaKnown RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 SPATA31A1Q5TZJ5 1347 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 SLC26A4O43511 780 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 KCNQ2O43526 872 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 TBCAO75347 108 aaKnown RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 PYGMP11217 842 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 HSPA6P17066 643 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 COILP38432 576 aaPredicted RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 MPP2Q14168 576 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 CTTNQ14247 550 aaKnown RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 KCNV2Q8TDN2 545 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 P2RX7Q99572 595 aaKnown RBP17.76■□□□□ 0.43
TRIM39-201ENST00000376656 PLIN4Q96Q06 1357 aa17.76■□□□□ 0.43
TRIM39-201ENST00000376656 IGKV6D-41A0A0C4DH26 115 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 FOXN3O00409 490 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-201ENST00000376656 COMTP21964 271 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 PEX19P40855 299 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 MGAT5Q09328 741 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 PICALMQ13492 652 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 MESDQ14696 234 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ANKRD20A2Q5SQ80 823 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ANKRD20A1Q5TYW2 823 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ANKRD20A3Q5VUR7 823 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 CAPRIN2Q6IMN6 1127 aaKnown RBP17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ZNF804AQ7Z570 1209 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ROPN1BQ9BZX4 212 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-201ENST00000376656 KIF9Q9HAQ2 790 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ROPN1Q9HAT0 212 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-201ENST00000376656 RXFP1Q9HBX9 757 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 MIF4GDA9UHW6 222 aaKnown RBP17.75■□□□□ 0.43
TRIM39-201ENST00000376656 PEX5P50542 639 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 CGB2Q6NT52 195 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 MIS18BP1Q6P0N0 1132 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 IFT74Q96LB3 600 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 RUNDC3BQ96NL0 473 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 AAASQ9NRG9 546 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 BCS1LQ9Y276 419 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 CYP3A7-CYP3A51PA0A087WV96 503 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 TTLL1O95922 423 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 FTLP02792 175 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-201ENST00000376656 CYP3A7P24462 503 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 LLGL1Q15334 1064 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ZNF568Q3ZCX4 644 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 SEL1L2Q5TEA6 688 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 C11orf63Q6NUN7 778 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ANKLE1Q8NAG6 615 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ARMC2Q8NEN0 867 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 ERMNQ8TAM6 284 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 CKAP2Q8WWK9 683 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 MBOAT7Q96N66 472 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 AGPAT1Q99943 283 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 APEX2Q9UBZ4 518 aa17.75■□□□□ 0.43
TRIM39-201ENST00000376656 EIF4E1BA6NMX2 242 aaKnown RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 ATP2A2P16615 1042 aaKnown RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 RRP1BQ14684 758 aaKnown RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 PHLDB3Q6NSJ2 640 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 ZNF483Q8TF39 744 aaPredicted RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 FAM167BQ9BTA0 163 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 TAOK3Q9H2K8 898 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 ABL2P42684 1182 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 HSPA2P54652 639 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 LACTBP83111 547 aaPredicted RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 ZNF746Q6NUN9 644 aaPredicted RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 MAEAQ7L5Y9 396 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 EME2A4GXA9 379 aaPredicted RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 O00370 1275 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 CYP2J2P51589 502 aa17.74■□□□□ 0.43
TRIM39-201ENST00000376656 HADHBP55084 474 aaKnown RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 DNAJC17Q9NVM6 304 aaKnown RBP17.74■□□□□ 0.43
TRIM39-201ENST00000376656 PASKQ96RG2 1323 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 TP73O15350 636 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms