RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 EIF2AQ9BY44 585 aaKnown RBP17.31■□□□□ 0.36
SDHB-201ENST00000375499 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
SDHB-201ENST00000375499 PCDHB2Q9Y5E7 798 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 ZNF318Q5VUA4 2279 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 C5orf42Q9H799 3197 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 INO80B-WBP1J3KQ70 363 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 LINC01565O15544 149 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 B4GALT5O43286 388 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 ZNF623O75123 536 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 EDN1P05305 212 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 LAG3P18627 525 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 LTBRP36941 435 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 PRPHP41219 470 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 DLX2Q07687 328 aaPredicted RBP17.3■□□□□ 0.36
SDHB-201ENST00000375499 SMAD2Q15796 467 aaKnown RBP17.3■□□□□ 0.36
SDHB-201ENST00000375499 CTC1Q2NKJ3 1217 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 HERC4Q5GLZ8 1057 aaPredicted RBP17.3■□□□□ 0.36
SDHB-201ENST00000375499 KCNT2Q6UVM3 1135 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 BMP8AQ7Z5Y6 402 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 TMEM173Q86WV6 379 aaPredicted RBP17.3■□□□□ 0.36
SDHB-201ENST00000375499 CDR2LQ86X02 465 aaPredicted RBP17.3■□□□□ 0.36
SDHB-201ENST00000375499 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 SMG8Q8ND04 991 aaKnown RBP17.3■□□□□ 0.36
SDHB-201ENST00000375499 BHMT2Q9H2M3 363 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 KIAA1024Q9UPX6 916 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 PCDHB12Q9Y5F1 795 aa17.3■□□□□ 0.36
SDHB-201ENST00000375499 ARHGEF35A5YM69 484 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 LRRIQ4A6NIV6 560 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 TTLL13PA6NNM8 815 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 E9PMD0 336 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 LAD1O00515 517 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 OFD1O75665 1012 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 ARF4P18085 180 aaPredicted RBP17.29■□□□□ 0.36
SDHB-201ENST00000375499 CYP11B2P19099 503 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 MUTP22033 750 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 RAB27AP51159 221 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 ERVFC1P60507 584 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 POU5F1BQ06416 359 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 TFDP1Q14186 410 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 PDIA5Q14554 519 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 CDCA2Q69YH5 1023 aaPredicted RBP17.29■□□□□ 0.36
SDHB-201ENST00000375499 THNSL1Q8IYQ7 743 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 NFKBIZQ9BYH8 718 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 AAASQ9NRG9 546 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 TBC1D13Q9NVG8 400 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 CLDND1Q9NY35 253 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 INPP5FQ9Y2H2 1132 aa17.29■□□□□ 0.36
SDHB-201ENST00000375499 NT5C1B-RDH14C9J2C7 533 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 FSCN2O14926 492 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 TBX10O75333 385 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 ERLIN2O94905 339 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 DTHD1Q6ZMT9 781 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 EP400NLQ6ZTU2 488 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 MRPL10Q7Z7H8 261 aaKnown RBP17.28■□□□□ 0.36
SDHB-201ENST00000375499 KIFC3Q9BVG8 833 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 USP20Q9Y2K6 914 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 HES2Q9Y543 173 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 IPPQ9Y573 584 aa17.28■□□□□ 0.36
SDHB-201ENST00000375499 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
SDHB-201ENST00000375499 VWA3AA6NCI4 1184 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 ZC3H11AO75152 810 aaKnown RBP eCLIP17.27■□□□□ 0.36
SDHB-201ENST00000375499 RBM10P98175 930 aaKnown RBP17.27■□□□□ 0.36
SDHB-201ENST00000375499 GRIN1Q05586 938 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 NOMO2Q5JPE7 1267 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 NOTUMQ6P988 496 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 HFE2Q6ZVN8 426 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 SLC39A11Q8N1S5 342 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 LRRC15Q8TF66 581 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 BCL7CQ8WUZ0 217 aaPredicted RBP17.27■□□□□ 0.36
SDHB-201ENST00000375499 EDAQ92838 391 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 PPP2R3CQ969Q6 453 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 ZNF558Q96NG5 402 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 PNMA5Q96PV4 448 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 RUSC1Q9BVN2 902 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 MRPL9Q9BYD2 267 aaKnown RBP17.27■□□□□ 0.36
SDHB-201ENST00000375499 NXF3Q9H4D5 531 aaKnown RBP17.27■□□□□ 0.36
SDHB-201ENST00000375499 IGFLR1Q9H665 355 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 NRDE2Q9H7Z3 1164 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 TLR9Q9NR96 1032 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
SDHB-201ENST00000375499 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.35
SDHB-201ENST00000375499 GLP2RO95838 553 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 SKIP12755 728 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 NCLP19338 710 aaKnown RBP17.26■□□□□ 0.35
SDHB-201ENST00000375499 BCAR1P56945 870 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 PLCB3Q01970 1234 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 UBE3AQ05086 875 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 PLPP4Q5VZY2 271 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 KRT79Q5XKE5 535 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 RBM23Q86U06 439 aaKnown RBP17.26■□□□□ 0.35
SDHB-201ENST00000375499 ZNF280BQ86YH2 543 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 DAW1Q8N136 415 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 MRPS27Q92552 414 aaKnown RBP17.26■□□□□ 0.35
SDHB-201ENST00000375499 PLIN2Q99541 437 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
SDHB-201ENST00000375499 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms