RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 TRIP12Q14669 1992 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-203ENST00000374116 SCN10AQ9Y5Y9 1956 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 FRMD3A2A2Y4 597 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 E9PMD0 336 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 LGR5O75473 907 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 SLITRK3O94933 977 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 PLA2G4BP0C869 781 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 IDEP14735 1019 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 SFNP31947 248 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 SLC12A3P55017 1021 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 IGBP1P78318 339 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 MIIPQ5JXC2 388 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 HAUS3Q68CZ6 603 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 NECAB2Q7Z6G3 386 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 ANKLE1Q8NAG6 615 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 ACRBPQ8NEB7 543 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 TTYH3Q9C0H2 523 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 SMARCAD1Q9H4L7 1026 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 HDAC6Q9UBN7 1215 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 PCDHA2Q9Y5H9 948 aa15.6■□□□□ 0.09
HMGA1-203ENST00000374116 EPN1Q9Y6I3 576 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-203ENST00000374116 A0A1W2PQJ5 194 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 NDUFA10O95299 355 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 CYP11B2P19099 503 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 TRIM21P19474 475 aaKnown RBP15.59■□□□□ 0.09
HMGA1-203ENST00000374116 ZBED6P86452 979 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 PLCB4Q15147 1175 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 EPHA7Q15375 998 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 MEA1Q16626 185 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 LRRC26Q2I0M4 334 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 SLC39A5Q6ZMH5 540 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 UBE2Q1Q7Z7E8 422 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 KCTD17Q8N5Z5 321 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 PPM1EQ8WY54 764 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 TSG101Q99816 390 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 LXNQ9BS40 222 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 ERAP1Q9NZ08 941 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 MAFBQ9Y5Q3 323 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-203ENST00000374116 EMSYQ7Z589 1322 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 PRKCEQ02156 737 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 PPP2R3AQ06190 1150 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 COASYQ13057 564 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 ARSHQ5FYA8 562 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 ZNF569Q5MCW4 686 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 PIGOQ8TEQ8 1089 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 CHP1Q99653 195 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 HSD17B14Q9BPX1 270 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 POLR3CQ9BUI4 534 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-203ENST00000374116 IRX2Q9BZI1 471 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-203ENST00000374116 SETD4Q9NVD3 440 aa15.59■□□□□ 0.09
HMGA1-203ENST00000374116 ZNHIT6Q9NWK9 470 aaKnown RBP15.59■□□□□ 0.09
HMGA1-203ENST00000374116 IGSF9BQ9UPX0 1349 aa15.58■□□□□ 0.09
HMGA1-203ENST00000374116 HAS3O00219 553 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 PQBP1O60828 265 aaKnown RBP15.58■□□□□ 0.08
HMGA1-203ENST00000374116 P4HBP07237 508 aaKnown RBP15.58■□□□□ 0.08
HMGA1-203ENST00000374116 SMIM10L2AP0DMW4 78 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 SMIM10L2BP0DMW5 78 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 ARHGAP25P42331 645 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 LMAN1P49257 510 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 CORO7P57737 925 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 TUBB4BP68371 445 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 TRIM60Q495X7 471 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 VWA3BQ502W6 1294 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 FAM160B1Q5W0V3 765 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 PLA2G4FQ68DD2 849 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 MYOCDQ8IZQ8 938 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 C7orf31Q8N865 590 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 ERMNQ8TAM6 284 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 TRMT13Q9NUP7 481 aaKnown RBP15.58■□□□□ 0.08
HMGA1-203ENST00000374116 PANK4Q9NVE7 773 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 ATP11BQ9Y2G3 1177 aa15.58■□□□□ 0.08
HMGA1-203ENST00000374116 A0A0U1RQJ8 604 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 CTAGE9A4FU28 777 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 H3BQF6 201 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 KPNA6O60684 536 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 QARSP47897 775 aaKnown RBP15.57■□□□□ 0.08
HMGA1-203ENST00000374116 CDK17Q00537 523 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 MAN2A1Q16706 1144 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 GDF6Q6KF10 455 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-203ENST00000374116 WDR59Q6PJI9 974 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 PLPPR4Q7Z2D5 763 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 CCDC65Q8IXS2 484 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 SYT2Q8N9I0 419 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-203ENST00000374116 GLIS3Q8NEA6 775 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 AFAP1L1Q8TED9 768 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 ATRIPQ8WXE1 791 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 PCMTD1Q96MG8 357 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-203ENST00000374116 TRPV6Q9H1D0 765 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 KAT6AQ92794 2004 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 ALPK3Q96L96 1907 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 CABYRO75952 493 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 STBD1O95210 358 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 INSRRP14616 1297 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 GYS2P54840 703 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 NPEPPSP55786 919 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 PSMC5P62195 406 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 KRT83P78385 493 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms