RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 DENND3A2RUS2 1198 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 ENPP3O14638 875 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 COASYQ13057 564 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 TMEM161BQ8NDZ6 487 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 CNNM3Q8NE01 707 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 SPIRE2Q8WWL2 714 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 HPS3Q969F9 1004 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 C7orf25Q9BPX7 421 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 FTHL17Q9BXU8 183 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 MTIF3Q9H2K0 278 aaKnown RBP20.41■□□□□ 0.86
CDX4-201ENST00000373514 PANK4Q9NVE7 773 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 LARSQ9P2J5 1176 aaKnown RBP20.41■□□□□ 0.86
CDX4-201ENST00000373514 USP25Q9UHP3 1055 aa20.41■□□□□ 0.86
CDX4-201ENST00000373514 ARF4P18085 180 aaPredicted RBP20.4■□□□□ 0.86
CDX4-201ENST00000373514 HOXA11P31270 313 aaPredicted RBP20.4■□□□□ 0.86
CDX4-201ENST00000373514 FAM117BQ6P1L5 589 aa20.4■□□□□ 0.86
CDX4-201ENST00000373514 FZD8Q9H461 694 aa20.4■□□□□ 0.86
CDX4-201ENST00000373514 CNTNAP2Q9UHC6 1331 aa20.39■□□□□ 0.86
CDX4-201ENST00000373514 UPP2O95045 317 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 MAPTP10636 758 aaKnown RBP20.39■□□□□ 0.85
CDX4-201ENST00000373514 AMPD3Q01432 767 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 MAPK6Q16659 721 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 FAM178BQ8IXR5 827 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 LRRC27Q9C0I9 530 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 NUP62CLQ9H1M0 184 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 CLSTN2Q9H4D0 955 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 RGS18Q9NS28 235 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 PRMT7Q9NVM4 692 aaPredicted RBP20.39■□□□□ 0.85
CDX4-201ENST00000373514 TRIP11Q15643 1979 aa20.39■□□□□ 0.85
CDX4-201ENST00000373514 KINO60870 393 aaKnown RBP20.38■□□□□ 0.85
CDX4-201ENST00000373514 EFCAB14O75071 495 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 AMHP03971 560 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 ATP2A2P16615 1042 aaKnown RBP20.38■□□□□ 0.85
CDX4-201ENST00000373514 ZSCAN20P17040 1043 aaPredicted RBP20.38■□□□□ 0.85
CDX4-201ENST00000373514 CASP5P51878 434 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 EFNA5P52803 228 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 RABGGTBP53611 331 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 FAM187BQ17R55 369 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 ZC2HC1CQ53FD0 456 aaPredicted RBP20.38■□□□□ 0.85
CDX4-201ENST00000373514 TWF2Q6IBS0 349 aaKnown RBP20.38■□□□□ 0.85
CDX4-201ENST00000373514 CNNM4Q6P4Q7 775 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 HAUS6Q7Z4H7 955 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 GLIS3Q8NEA6 775 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 SLC9A7Q96T83 725 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 NTPCRQ9BSD7 190 aaKnown RBP20.38■□□□□ 0.85
CDX4-201ENST00000373514 TDRD15B5MCY1 1934 aaKnown RBP20.38■□□□□ 0.85
CDX4-201ENST00000373514 LAMA3Q16787 3333 aa20.38■□□□□ 0.85
CDX4-201ENST00000373514 SYCE3A1L190 88 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 C9IYK1 514 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 GTPBP6O43824 516 aaPredicted RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 KLRC4O43908 158 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 MYBP10242 640 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 GAP43P17677 238 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 SMTNP53814 917 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 ZNF445P59923 1031 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 PRPF4BQ13523 1007 aaKnown RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 HERC4Q5GLZ8 1057 aaPredicted RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 UBXN11Q5T124 520 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 NT5DC1Q5TFE4 455 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 CCDC65Q8IXS2 484 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 ERCC4Q92889 916 aaPredicted RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 EIF2AQ9BY44 585 aaKnown RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 PDZD7Q9H5P4 517 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 TMEM134Q9H6X4 195 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 LAMA2P24043 3122 aaKnown RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 A0A1W2PPC1 479 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 K7ERI5 159 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 SOX1O00570 391 aaPredicted RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 ATF7P17544 494 aaPredicted RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 SARSP49591 514 aaKnown RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 PNOCQ13519 176 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 GSE1Q14687 1217 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 CAMK4Q16566 473 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 TMEM132AQ24JP5 1023 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 EEF1DP3Q658K8 133 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 UNC13DQ70J99 1090 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 HERC6Q8IVU3 1022 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 PRIMPOLQ96LW4 560 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 IKZF4Q9H2S9 585 aa20.37■□□□□ 0.85
CDX4-201ENST00000373514 MRPL44Q9H9J2 332 aaKnown RBP20.37■□□□□ 0.85
CDX4-201ENST00000373514 PDCD11Q14690 1871 aaKnown RBP20.36■□□□□ 0.85
CDX4-201ENST00000373514 RALGAPA2Q2PPJ7 1873 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 CITO14578 2027 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 ACKR2O00590 384 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 LETM1O95202 739 aaPredicted RBP20.36■□□□□ 0.85
CDX4-201ENST00000373514 MYOGP15173 224 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 PBX2P40425 430 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 GATMP50440 423 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 EHHADHQ08426 723 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 DPYDQ12882 1025 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 NOTUMQ6P988 496 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 SLC24A5Q71RS6 500 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 CRIPAKQ8N1N5 446 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 CHST12Q9NRB3 414 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 OLFML3Q9NRN5 406 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 C1orf112Q9NSG2 853 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 FAM105AQ9NUU6 356 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 SEL1LQ9UBV2 794 aa20.36■□□□□ 0.85
CDX4-201ENST00000373514 ANK1P16157 1881 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms