RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 RAB27AP51159 221 aa23.5■■□□□ 1.35
TMEM54-202ENST00000373463 AFF1P51825 1210 aaKnown RBP23.5■■□□□ 1.35
TMEM54-202ENST00000373463 FAM187BQ17R55 369 aa23.5■■□□□ 1.35
TMEM54-202ENST00000373463 LINC00301Q8NCQ3 95 aa23.5■■□□□ 1.35
TMEM54-202ENST00000373463 CDK5RAP3Q96JB5 506 aa23.5■■□□□ 1.35
TMEM54-202ENST00000373463 PLVAPQ9BX97 442 aa23.5■■□□□ 1.35
TMEM54-202ENST00000373463 PLAGL2Q9UPG8 496 aa23.5■■□□□ 1.35
TMEM54-202ENST00000373463 MYH11P35749 1972 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 NPHP3-ACAD11A0A0J9YXS1 232 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 SSBP05455 408 aaKnown RBP eCLIP23.49■■□□□ 1.35
TMEM54-202ENST00000373463 RAD51AP2Q09MP3 1159 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 NOTUMQ6P988 496 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 KLHL23Q8NBE8 558 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 SYMPKQ92797 1274 aaKnown RBP23.49■■□□□ 1.35
TMEM54-202ENST00000373463 P2RX5Q93086 422 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 MRPL38Q96DV4 380 aaKnown RBP23.49■■□□□ 1.35
TMEM54-202ENST00000373463 C11orf84Q9BUA3 381 aaPredicted RBP23.49■■□□□ 1.35
TMEM54-202ENST00000373463 RNF39Q9H2S5 420 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 ALG13Q9NP73 1137 aaKnown RBP23.49■■□□□ 1.35
TMEM54-202ENST00000373463 ZDHHC9Q9Y397 364 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 IPPQ9Y573 584 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 MYO7AQ13402 2215 aa23.49■■□□□ 1.35
TMEM54-202ENST00000373463 A0A1B0GUA9 196 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 SFI1A8K8P3 1242 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 B4GALT3O60512 393 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 OFD1O75665 1012 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 SKIP12755 728 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 NPTX2P47972 431 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 PEX3P56589 373 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 PPP2R5AQ15172 486 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 TAS1R3Q7RTX0 852 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 ZBTB8OSQ8IWT0 167 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 COLGALT1Q8NBJ5 622 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 DEPTORQ8TB45 409 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 SPPL3Q8TCT6 385 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 CCDC51Q96ER9 411 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 CALML4Q96GE6 196 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 C2orf40Q9H1Z8 148 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 PRMT7Q9NVM4 692 aaPredicted RBP23.48■■□□□ 1.35
TMEM54-202ENST00000373463 HES2Q9Y543 173 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 CNTNAP2Q9UHC6 1331 aa23.48■■□□□ 1.35
TMEM54-202ENST00000373463 UNC80Q8N2C7 3258 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 NCLP19338 710 aaKnown RBP23.47■■□□□ 1.35
TMEM54-202ENST00000373463 PBX3P40426 434 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 CACNB1Q02641 598 aaPredicted RBP23.47■■□□□ 1.35
TMEM54-202ENST00000373463 MCM6Q14566 821 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
TMEM54-202ENST00000373463 NAALADL2Q58DX5 795 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
TMEM54-202ENST00000373463 ABI1Q8IZP0 508 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 LRRC43Q8N309 656 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 RAD54LQ92698 747 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 IFT74Q96LB3 600 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 PRIMPOLQ96LW4 560 aa23.47■■□□□ 1.35
TMEM54-202ENST00000373463 A0A087X0B3 334 aa23.46■■□□□ 1.35
TMEM54-202ENST00000373463 PRKCBP05771 671 aa23.46■■□□□ 1.35
TMEM54-202ENST00000373463 PDIA4P13667 645 aaKnown RBP23.46■■□□□ 1.35
TMEM54-202ENST00000373463 NT5DC1Q5TFE4 455 aa23.46■■□□□ 1.35
TMEM54-202ENST00000373463 EEF1DP3Q658K8 133 aa23.46■■□□□ 1.35
TMEM54-202ENST00000373463 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEM54-202ENST00000373463 NXF3Q9H4D5 531 aaKnown RBP23.46■■□□□ 1.35
TMEM54-202ENST00000373463 PDZD7Q9H5P4 517 aa23.46■■□□□ 1.35
TMEM54-202ENST00000373463 TBC1D13Q9NVG8 400 aa23.46■■□□□ 1.35
TMEM54-202ENST00000373463 ARHGAP28Q9P2N2 729 aa23.46■■□□□ 1.35
TMEM54-202ENST00000373463 ACKR2O00590 384 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 DHX8Q14562 1220 aaKnown RBP23.45■■□□□ 1.34
TMEM54-202ENST00000373463 STK38Q15208 465 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 MAPK6Q16659 721 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 NOMO2Q5JPE7 1267 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 GPBP1Q86WP2 473 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 KRI1Q8N9T8 703 aaKnown RBP23.45■■□□□ 1.34
TMEM54-202ENST00000373463 SLC17A8Q8NDX2 589 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 PGBD4Q96DM1 585 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 CHAMP1Q96JM3 812 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 DRC1Q96MC2 740 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 ZNF396Q96N95 335 aaPredicted RBP23.45■■□□□ 1.34
TMEM54-202ENST00000373463 TIPINQ9BVW5 301 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 LMAN2LQ9H0V9 348 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 INPP5FQ9Y2H2 1132 aa23.45■■□□□ 1.34
TMEM54-202ENST00000373463 SPTLC2O15270 562 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 NPTXRO95502 500 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 YEATS4O95619 227 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 LAG3P18627 525 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 LIG1P18858 919 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 SPOUT1Q5T280 376 aaKnown RBP23.44■■□□□ 1.34
TMEM54-202ENST00000373463 SLC27A1Q6PCB7 646 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 KCNT2Q6UVM3 1135 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 GLB1LQ6UWU2 654 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 LARP4BQ92615 738 aaKnown RBP23.44■■□□□ 1.34
TMEM54-202ENST00000373463 REEP2Q9BRK0 252 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 NTPCRQ9BSD7 190 aaKnown RBP23.44■■□□□ 1.34
TMEM54-202ENST00000373463 RSAD1Q9HA92 442 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 KCND2Q9NZV8 630 aa23.44■■□□□ 1.34
TMEM54-202ENST00000373463 CCDC169A6NNP5 214 aa23.43■■□□□ 1.34
TMEM54-202ENST00000373463 INPPL1O15357 1258 aa23.43■■□□□ 1.34
TMEM54-202ENST00000373463 FGF18O76093 207 aa23.43■■□□□ 1.34
TMEM54-202ENST00000373463 CSPG5O95196 566 aa23.43■■□□□ 1.34
TMEM54-202ENST00000373463 BRD1O95696 1058 aa23.43■■□□□ 1.34
TMEM54-202ENST00000373463 IRS1P35568 1242 aa23.43■■□□□ 1.34
TMEM54-202ENST00000373463 EFNA5P52803 228 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms