RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 FBXL21Q9UKT6 434 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 C2orf16Q68DN1 1984 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 JAK2O60674 1132 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 GAS7O60861 476 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
RPF1-202ENST00000370656 FDPSP14324 419 aaKnown RBP16.88■□□□□ 0.29
RPF1-202ENST00000370656 IFNAR1P17181 557 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 CDC27P30260 824 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 AKAP17AQ02040 695 aaKnown RBP16.88■□□□□ 0.29
RPF1-202ENST00000370656 LARP1BQ659C4 914 aaKnown RBP16.88■□□□□ 0.29
RPF1-202ENST00000370656 KANK3Q6NY19 840 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 PGBD4Q96DM1 585 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 TEKT3Q9BXF9 490 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 TBC1D13Q9NVG8 400 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 PIN4Q9Y237 131 aaKnown RBP16.88■□□□□ 0.29
RPF1-202ENST00000370656 INPP5FQ9Y2H2 1132 aa16.88■□□□□ 0.29
RPF1-202ENST00000370656 FRYLO94915 3013 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 CACNA1AO00555 2505 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 CHMP2AO43633 222 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 CDKL5O76039 1030 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 GALTP07902 379 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
RPF1-202ENST00000370656 KLRC2P26717 231 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
RPF1-202ENST00000370656 LRCH2Q5VUJ6 765 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 CWF19L1Q69YN2 538 aaKnown RBP16.87■□□□□ 0.29
RPF1-202ENST00000370656 ELMSAN1Q6PJG2 1045 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 ZNF410Q86VK4 478 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 TMEM173Q86WV6 379 aaPredicted RBP16.87■□□□□ 0.29
RPF1-202ENST00000370656 CCDC105Q8IYK2 499 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 CCDC148Q8NFR7 591 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 RDM1Q8NG50 284 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 URGCPQ8TCY9 931 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 LPPQ93052 612 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 LENG9Q96B70 501 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 GBP3Q9H0R5 595 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 NRDE2Q9H7Z3 1164 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 FAM105AQ9NUU6 356 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 IGSF9Q9P2J2 1179 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 SEPT9Q9UHD8 586 aaPredicted RBP16.87■□□□□ 0.29
RPF1-202ENST00000370656 DUSP12Q9UNI6 340 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 STK36Q9NRP7 1315 aa16.87■□□□□ 0.29
RPF1-202ENST00000370656 A0A087WZ62 844 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 MSH4O15457 936 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 RFX1P22670 979 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 USP11P51784 963 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 NONOQ15233 471 aaKnown RBP eCLIP16.86■□□□□ 0.29
RPF1-202ENST00000370656 ANGPT1Q15389 498 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 TARBP2Q15633 366 aaKnown RBP16.86■□□□□ 0.29
RPF1-202ENST00000370656 PTPN14Q15678 1187 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 UGCGQ16739 394 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 LONRF3Q496Y0 759 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 MTERF2Q49AM1 385 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 XKR3Q5GH77 459 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 CPLX2Q6PUV4 134 aaKnown RBP16.86■□□□□ 0.29
RPF1-202ENST00000370656 C15orf39Q6ZRI6 1047 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 FAM193BQ96PV7 902 aaPredicted RBP16.86■□□□□ 0.29
RPF1-202ENST00000370656 JPH2Q9BR39 696 aaPredicted RBP16.86■□□□□ 0.29
RPF1-202ENST00000370656 FDXACB1Q9BRP7 624 aaPredicted RBP16.86■□□□□ 0.29
RPF1-202ENST00000370656 NIFKQ9BYG3 293 aaKnown RBP16.86■□□□□ 0.29
RPF1-202ENST00000370656 KCNK12Q9HB15 430 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 DPP7Q9UHL4 492 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 DMXL1Q9Y485 3027 aa16.86■□□□□ 0.29
RPF1-202ENST00000370656 STK25O00506 426 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
RPF1-202ENST00000370656 ZNF623O75123 536 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 OFD1O75665 1012 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 MCM4P33991 863 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 CLCN4P51793 760 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 MIER3Q7Z3K6 550 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 RHPN2Q8IUC4 686 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 SIX5Q8N196 739 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 DTWD2Q8NBA8 298 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 SLC5A5Q92911 643 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 SEMA4AQ9H3S1 761 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 MRPL17Q9NRX2 175 aaKnown RBP16.85■□□□□ 0.29
RPF1-202ENST00000370656 KANSL3Q9P2N6 904 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 SUCLA2Q9P2R7 463 aaPredicted RBP16.85■□□□□ 0.29
RPF1-202ENST00000370656 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
RPF1-202ENST00000370656 EP300Q09472 2414 aaPredicted RBP16.85■□□□□ 0.29
RPF1-202ENST00000370656 CPLX1O14810 134 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 PI15O43692 258 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 BAG4O95429 457 aaKnown RBP16.84■□□□□ 0.29
RPF1-202ENST00000370656 ALDH2P05091 517 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 NPR3P17342 541 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 SLC11A1P49279 550 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 DRP2Q13474 957 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 KCNG4Q8TDN1 519 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 BCL7CQ8WUZ0 217 aaPredicted RBP16.84■□□□□ 0.29
RPF1-202ENST00000370656 STAMQ92783 540 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 KLHL5Q96PQ7 755 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 UNC45AQ9H3U1 944 aa16.84■□□□□ 0.29
RPF1-202ENST00000370656 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms