RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 KDM5CP41229 1560 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.29
HCFC1-202ENST00000369984 RHOBTB1O94844 696 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 KRT7P08729 469 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 ROR1Q01973 937 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 KRT17Q04695 432 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 MED21Q13503 144 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 ZNF507Q8TCN5 953 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 CFAP69A5D8W1 941 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 CLDN3O15551 220 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 CCDC22O60826 627 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 ZNF667Q5HYK9 610 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 GRID2IPA4D2P6 1211 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 HEATR6Q6AI08 1181 aaKnown RBP13.21□□□□□ -0.3
HCFC1-202ENST00000369984 USP17L3A6NCW0 530 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 USP17L4A6NCW7 530 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 PHKG2P15735 406 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 SLC9A1P19634 815 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 RRM2BQ7LG56 351 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 USP17L1Q7RTZ2 530 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.3
HCFC1-202ENST00000369984 SH3GLB2Q9NR46 395 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 POLIQ9UNA4 740 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 MYO1DO94832 1006 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 ARIH2O95376 493 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 MAP4P27816 1152 aaKnown RBP13.21□□□□□ -0.3
HCFC1-202ENST00000369984 FASTKD1Q53R41 847 aaKnown RBP13.21□□□□□ -0.3
HCFC1-202ENST00000369984 OLFML2BQ68BL8 750 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 ZBED8Q8IZ13 594 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 AFG1LQ8WV93 481 aa13.21□□□□□ -0.3
HCFC1-202ENST00000369984 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.38e-7■■□□□ 12.1
HCFC1-202ENST00000369984 KRT72Q14CN4 511 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 GFM2Q969S9 779 aaKnown RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 HIC1Q14526 733 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 LRRC31Q6UY01 552 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 PLD3Q8IV08 490 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 ELMOD1Q8N336 334 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 ASAP2O43150 1006 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 BRAFP15056 766 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 CYTH1Q15438 398 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 PKD2L2Q9NZM6 624 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 TCP11X1B4DZS4 312 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 LZTS3O60299 673 aaPredicted RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 S100A5P33763 92 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 CCDC137Q6PK04 289 aaKnown RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 ATXN7L3BQ96GX2 97 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 CASS4Q9NQ75 786 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 NEMP1O14524 444 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 ADCY3O60266 1144 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 GRK2P25098 689 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 LRRC14Q15048 493 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 ANGPT1Q15389 498 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 SESN1Q9Y6P5 492 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 PDIA2Q13087 525 aaKnown RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 RESTQ13127 1097 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 NME3Q13232 169 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 PI4KBQ9UBF8 816 aa13.2□□□□□ -0.3
HCFC1-202ENST00000369984 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 AFF4Q9UHB7 1163 aaKnown RBP13.2□□□□□ -0.3
HCFC1-202ENST00000369984 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 PSMD7P51665 324 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
HCFC1-202ENST00000369984 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 BHMT2Q9H2M3 363 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 RAB14P61106 215 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 ATP6V1G3Q96LB4 118 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 SP110Q9HB58 689 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 GDAQ9Y2T3 454 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 PTPRTO14522 1441 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 LGALS16A8MUM7 142 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 STXBP3O00186 592 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 TBC1D4O60343 1298 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 TCF3P15923 654 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 HSPA9P38646 679 aaKnown RBP13.19□□□□□ -0.3
HCFC1-202ENST00000369984 SNAP25P60880 206 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 PBXIP1Q96AQ6 731 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
HCFC1-202ENST00000369984 FBXL5Q9UKA1 691 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 NR3C1P04150 777 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 GNA15P30679 374 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 MAPRE2Q15555 327 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 GRAMD1AQ96CP6 724 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 COPRSQ9NQ92 184 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 ENO1P06733 434 aaKnown RBP13.19□□□□□ -0.3
HCFC1-202ENST00000369984 PRAMEP78395 509 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms