RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 POTEGQ6S5H5 508 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 ANO5Q75V66 913 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 CATIPQ7Z7H3 387 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 DHX40Q8IX18 779 aaKnown RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 CAGE1Q8TC20 777 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 SNRNP27Q8WVK2 155 aaKnown RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 LMBR1Q8WVP7 490 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 SAAL1Q96ER3 474 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 OSBPL9Q96SU4 736 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 RHOBTB2Q9BYZ6 727 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 KLC4Q9NSK0 619 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 TRMT13Q9NUP7 481 aaKnown RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 PTPDC1A2A3K4 754 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 GCOM1H8Y6P7 765 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 AP1G2O75843 785 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 SMNDC1O75940 238 aaKnown RBP eCLIP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 POLR2MP0CAP2 368 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 SMIM10L2AP0DMW4 78 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 SMIM10L2BP0DMW5 78 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 PSEN2P49810 448 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 ARHGAP4P98171 946 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 FAM187BQ17R55 369 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 TMEM119Q4V9L6 283 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 TMEM184AQ6ZMB5 413 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 B4GALNT4Q76KP1 1039 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 TAS1R3Q7RTX0 852 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 MRPL10Q7Z7H8 261 aaKnown RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 CCDC170Q8IYT3 715 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 GSTCDQ8NEC7 633 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 TRPV6Q9H1D0 765 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 UNC45AQ9H3U1 944 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 SMIM35A0A1B0GVV1 85 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 ERLIN1O75477 346 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 DEXIO95424 95 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 FOSP01100 380 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 ARL2P36404 184 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 PPP2R3AQ06190 1150 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 LRRC55Q6ZSA7 311 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 FAM228AQ86W67 206 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 DRC7Q8IY82 874 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 ZNF579Q8NAF0 562 aaKnown RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 PARD3BQ8TEW8 1205 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 LEO1Q8WVC0 666 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 BADQ92934 168 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 FOXP1Q9H334 677 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-204ENST00000369530 CWH43Q9H720 699 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 XPNPEP1Q9NQW7 623 aa7.53□□□□□ -1.2
CSDE1-204ENST00000369530 OPA1O60313 960 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 PPP1R37O75864 691 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 NPTXRO95502 500 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 C1RP00736 705 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 SUPT20HL2P0C7V6 817 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 SLC8A1P32418 973 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 SLC26A2P50443 739 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 GRM1Q13255 1194 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 TRIM29Q14134 588 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 ADGRE1Q14246 886 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 MCM6Q14566 821 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 LPIN1Q14693 890 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 ZRSR2Q15696 482 aaKnown RBP7.52□□□□□ -1.21
CSDE1-204ENST00000369530 RTN1Q16799 776 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 MIS18BP1Q6P0N0 1132 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 KIAA0319LQ8IZA0 1049 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 DAW1Q8N136 415 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 AFG1LQ8WV93 481 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 UBAC1Q9BSL1 405 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 FAM204AQ9H8W3 233 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 VWA3AA6NCI4 1184 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 A6NHS1 94 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 BIN1O00499 593 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 EIF3HO15372 352 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSDE1-204ENST00000369530 SLITRK3O94933 977 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 HOXA11P31270 313 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-204ENST00000369530 ROR2Q01974 943 aaKnown RBP7.52□□□□□ -1.21
CSDE1-204ENST00000369530 AKAP17AQ02040 695 aaKnown RBP7.52□□□□□ -1.21
CSDE1-204ENST00000369530 IFFO1Q0D2I5 559 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 TMED1Q13445 227 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 MFSD10Q14728 455 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 SRGAP1Q7Z6B7 1085 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 EZH1Q92800 747 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-204ENST00000369530 PHKBQ93100 1093 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 VN1R3Q9BXE9 311 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 CDHR5Q9HBB8 845 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 CD248Q9HCU0 757 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 STXBP5LQ9Y2K9 1186 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 PCDHGC5Q9Y5F6 944 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSDE1-204ENST00000369530 NRCAMQ92823 1304 aa7.52□□□□□ -1.21
CSDE1-204ENST00000369530 C19orf67A6NJJ6 358 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 ME1P48163 572 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 IRAK1P51617 712 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 ZNF200P98182 395 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 DEUP1Q05D60 604 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 TTLL4Q14679 1199 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 CASP8Q14790 479 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 HSP90B2PQ58FF3 399 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 CRELD2Q6UXH1 353 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 SPRED2Q7Z698 418 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 LSM14AQ8ND56 463 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms