RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 POLD1P28340 1107 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 CNGA1P29973 690 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 SOX5P35711 763 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 PAPOLAP51003 745 aaKnown RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 PRPF4BQ13523 1007 aaKnown RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 MTFR1Q15390 333 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 ANO7Q6IWH7 933 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 APBB1IPQ7Z5R6 666 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 GPBP1Q86WP2 473 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 DNAAF5Q86Y56 855 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 STK32AQ8WU08 396 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 MAGEB18Q96M61 343 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 NAP1L4Q99733 375 aaKnown RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 ZNF287Q9HBT7 754 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 OSGEPQ9NPF4 335 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 SRP68Q9UHB9 627 aaKnown RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 ASB3Q9Y575 518 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 PEX11AO75192 247 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 TCEA3O75764 348 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 ZBTB7AO95365 584 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 RASA1P20936 1047 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 FGFR4P22455 802 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 CDC25CP30307 473 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 SPDYAQ5MJ70 313 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 SPTY2D1Q68D10 685 aaPredicted RBP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 EPM2AIP1Q7L775 607 aaPredicted RBP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 RHOT2Q8IXI1 618 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 PRELID2Q8N945 189 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 FAM167BQ9BTA0 163 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 CCDC113Q9H0I3 377 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 GCNT4Q9P109 453 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 GGT7Q9UJ14 662 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 DBR1Q9UK59 544 aaKnown RBP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 PFASO15067 1338 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 IGSF9BQ9UPX0 1349 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 PTGER2P43116 358 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 SLCO1A2P46721 670 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 SF3A3Q12874 501 aaKnown RBP eCLIP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 BMT2Q1RMZ1 405 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 WASHC2DQ5SRD0 308 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 UBL4BQ8N7F7 174 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 ALG3Q92685 438 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 HAS1Q92839 578 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 UTP4Q969X6 686 aaKnown RBP11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 C18orf8Q96DM3 657 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 RMDN2Q96LZ7 410 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 PIGSQ96S52 555 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 ARHGEF10LQ9HCE6 1279 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 STX8Q9UNK0 236 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
LYSMD1-201ENST00000368908 DPPA5A6NC42 116 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ANKRD62A6NC57 917 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 RPL13P26373 211 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 TM4SF1P30408 202 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 SF3B3Q15393 1217 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 TSNAXIP1Q2TAA8 658 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 UBAP2Q5T6F2 1119 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 CGB2Q6NT52 195 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 GALNT15Q8N3T1 639 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 MORC4Q8TE76 937 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 PIGOQ8TEQ8 1089 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 SLC35C1Q96A29 364 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ETNK1Q9HBU6 452 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 PAPOLBQ9NRJ5 636 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 LGALS13Q9UHV8 139 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 MINPP1Q9UNW1 487 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ACTL7BQ9Y614 415 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ADGRA3Q8IWK6 1321 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 LMNAP02545 664 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 TPBGLP0DKB5 382 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 PRDX5P30044 214 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 COPB2P35606 906 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 NOVP48745 357 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 MGAT5Q09328 741 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 LRRC14Q15048 493 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 THEMIS2Q5TEJ8 643 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 MROH7Q68CQ1 1323 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ARHGEF18Q6ZSZ5 1173 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 INTS8Q75QN2 995 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 SLC51AQ86UW1 340 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 NEDD1Q8NHV4 660 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms