RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 PCDHA2Q9Y5H9 948 aa9.58□□□□□ -0.88
THBS3-201ENST00000368378 ALG6Q9Y672 507 aa9.58□□□□□ -0.88
THBS3-201ENST00000368378 GOLGA6L10A0A0M3HER8 536 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 ARHGEF35A5YM69 484 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 BBOX1O75936 387 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 GNA14O95837 355 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 GCFC2P16383 781 aaKnown RBP9.57□□□□□ -0.88
THBS3-201ENST00000368378 SCP2P22307 547 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 ECHS1P30084 290 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 KDM7AQ6ZMT4 941 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 NT5DC3Q86UY8 548 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 NME8Q8N427 588 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 GLIS2Q9BZE0 524 aaPredicted RBP9.57□□□□□ -0.88
THBS3-201ENST00000368378 EDEM3Q9BZQ6 932 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 KLC4Q9NSK0 619 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 TTC7AQ9ULT0 858 aaPredicted RBP9.57□□□□□ -0.88
THBS3-201ENST00000368378 LAMA3Q16787 3333 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 MYO3BQ8WXR4 1341 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 A0A1W2PRG0 241 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 CLDN3O15551 220 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 TGFB1I1O43294 461 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 RAD17O75943 681 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 FMO5P49326 533 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 NPEPPSP55786 919 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 ITIH3Q06033 890 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 MYBPC2Q14324 1141 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 EPHA7Q15375 998 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 GKAP1Q5VSY0 366 aaPredicted RBP9.57□□□□□ -0.88
THBS3-201ENST00000368378 PLA2G4FQ68DD2 849 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 ARHGEF19Q8IW93 802 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 KCNV2Q8TDN2 545 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 FZD1Q9UP38 647 aa9.57□□□□□ -0.88
THBS3-201ENST00000368378 IGKV6D-41A0A0C4DH26 115 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 HMGB1P1B2RPK0 211 aaPredicted RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 SLC16A4O15374 487 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 SGPL1O95470 568 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 FAM107AO95990 144 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 COMTP21964 271 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 PSMC2P35998 433 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 SMAD1Q15797 465 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 IFI16Q16666 785 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 EAPPQ56P03 285 aaPredicted RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 APOBEC3HQ6NTF7 200 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 GET4Q7L5D6 327 aaPredicted RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 TMC3Q7Z5M5 1100 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 SLC47A2Q86VL8 602 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 LRRC34Q8IZ02 419 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 PRCCQ92733 491 aaPredicted RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 ZNF577Q9BSK1 485 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 INTS2Q9H0H0 1204 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 PARVGQ9HBI0 331 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 INTS9Q9NV88 658 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 AIPL1Q9NZN9 384 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 TRIM33Q9UPN9 1127 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 F8VZ95 297 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 SOX5P35711 763 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 PEX3P56589 373 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 NAA25Q14CX7 972 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 CRY2Q49AN0 593 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 SEZ6Q53EL9 994 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 FAM102BQ5T8I3 360 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 CCDC137Q6PK04 289 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 C15orf52Q6ZUT6 534 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 ZNF572Q7Z3I7 529 aaPredicted RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 HVCN1Q96D96 273 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 LXNQ9BS40 222 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 WDR18Q9BV38 432 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 KCNMB3Q9NPA1 279 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 TYW1Q9NV66 732 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 WDR91A4D1P6 747 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 GOLGA8SH3BPF8 625 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 GOLGA8MH3BSY2 632 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 HIP1RO75146 1068 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 BMP3P12645 472 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 EIF2AK2P19525 551 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 NOVP48745 357 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 PMS2P54278 862 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 AOC3Q16853 763 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 ZNF394Q53GI3 561 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 GLE1Q53GS7 698 aaKnown RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 SYDE2Q5VT97 1194 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 RUFY4Q6ZNE9 571 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 JAMLQ86YT9 394 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 LRRC57Q8N9N7 239 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 LMBR1Q8WVP7 490 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 N4BP2L2Q92802 583 aaPredicted RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 ZNF653Q96CK0 615 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 C9orf72Q96LT7 481 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 FHDC1Q9C0D6 1143 aaPredicted RBP9.56□□□□□ -0.88
THBS3-201ENST00000368378 SWAP70Q9UH65 585 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 RPS6KL1Q9Y6S9 549 aa9.56□□□□□ -0.88
THBS3-201ENST00000368378 KAT6AQ92794 2004 aa9.55□□□□□ -0.88
THBS3-201ENST00000368378 COL24A1Q17RW2 1714 aa9.55□□□□□ -0.88
THBS3-201ENST00000368378 BRCA2P51587 3418 aa9.55□□□□□ -0.88
THBS3-201ENST00000368378 NHSQ6T4R5 1651 aa9.55□□□□□ -0.88
THBS3-201ENST00000368378 ARFGEF1Q9Y6D6 1849 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms