RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 NOP58Q9Y2X3 529 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 CTDP1Q9Y5B0 961 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 hCG_2014768A0A024R1R8 64 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 EYA4O95677 639 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 ZBTB48P10074 688 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 CPEP16870 476 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 NR4A1P22736 598 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 CLK3P49761 638 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 KIF11P52732 1056 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 RABGGTBP53611 331 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 ACAP1Q15027 740 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 MICALCLQ6ZW33 695 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 C11orf74Q86VG3 221 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 PRPF38AQ8NAV1 312 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 HIPK4Q8NE63 616 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 STAG1Q8WVM7 1258 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 ATXN2LQ8WWM7 1075 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 E2F7Q96AV8 911 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 GBP4Q96PP9 640 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 MNTQ99583 582 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 H2AFY2Q9P0M6 372 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-201ENST00000368287 CTGFP29279 349 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 SDHAP31040 664 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 RGS19P49795 217 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 ADCY7P51828 1080 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 KPNA1P52294 538 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 IL2P60568 153 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 DSG1Q02413 1049 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 SEC23AQ15436 765 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 TIGD2Q4W5G0 525 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 CREB3L3Q68CJ9 461 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 NME9Q86XW9 330 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 MB21D1Q8N884 522 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 KIAA1958Q8N8K9 716 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 ERCC4Q92889 916 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 USP7Q93009 1102 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 SLC7A6OSQ96CW6 309 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 RPL10LQ96L21 214 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 BRINP2Q9C0B6 783 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 RSAD1Q9HA92 442 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 OXSMQ9NWU1 459 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 THG1LQ9NWX6 298 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 ATP8A1Q9Y2Q0 1164 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 VWA7Q9Y334 891 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 ASB1Q9Y576 335 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 HS3ST4Q9Y661 456 aa4.82□□□□□ -1.64
ECHDC1-201ENST00000368287 UBE2QL1A1L167 161 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 GOLGA8BA8MQT2 603 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 NEMP1O14524 444 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 MMEP08473 750 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 ATP2A2P16615 1042 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 ADCYAP1R1P41586 468 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 IGBP1P78318 339 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 FAM50AQ14320 339 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 DHCR24Q15392 516 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 FKBP15Q5T1M5 1219 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 KLHDC10Q6PID8 442 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 ZZZ3Q8IYH5 903 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 ANKRD13AQ8IZ07 590 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 ZCRB1Q8TBF4 217 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 CALML6Q8TD86 181 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 ASB15Q8WXK1 588 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 GPHA2Q96T91 129 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 TCF25Q9BQ70 676 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 TOMM22Q9NS69 142 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 SPO11Q9Y5K1 396 aa4.81□□□□□ -1.64
ECHDC1-201ENST00000368287 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 PRAMEF22A3QJZ6 481 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 DVL2O14641 736 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 H2AFYO75367 372 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 BPIP17213 487 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 SLC9A1P19634 815 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 CDK11BP21127 795 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 IBSPP21815 317 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 FNTBP49356 437 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 USP14P54578 494 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 SESN2P58004 480 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 BPIFB4P59827 614 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 TAP1Q03518 808 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 ADCY1Q08828 1119 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 MAP3K12Q12852 859 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 FBXO42Q6P3S6 717 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 HTR3DQ70Z44 454 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 HDGFL2Q7Z4V5 671 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 ELOA2Q8IYF1 753 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 EFHBQ8N7U6 833 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 ANKRD53Q8N9V6 530 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 SMC1BQ8NDV3 1235 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 SUPT20HQ8NEM7 779 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 CHTF18Q8WVB6 975 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 GCDHQ92947 438 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 GPR101Q96P66 508 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 TTC1Q99614 292 aa4.8□□□□□ -1.64
ECHDC1-201ENST00000368287 GOLGA6L22H0YM25 854 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 ZEB2O60315 1214 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 MFAP3LO75121 409 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 FKBP9O95302 570 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 LSSP48449 732 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 ANAPC15P60006 121 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms