RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 XDHP47989 1333 aa9.21□□□□□ -0.93
H3F3A-201ENST00000366813 A0A1W2PQU0 124 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 NOP56O00567 594 aaKnown RBP9.21□□□□□ -0.94
H3F3A-201ENST00000366813 SRGAP3O43295 1099 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 EIF2S2P20042 333 aaKnown RBP9.21□□□□□ -0.94
H3F3A-201ENST00000366813 LIMS1P48059 325 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 MMP14P50281 582 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 CORO7P57737 925 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 SNAPC2Q13487 334 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 ATXN2LQ8WWM7 1075 aaKnown RBP9.21□□□□□ -0.94
H3F3A-201ENST00000366813 SPATA9Q9BWV2 254 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 EPHX3Q9H6B9 360 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 RTEL1Q9NZ71 1219 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 LRP2BPQ9P2M1 347 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 FAN1Q9Y2M0 1017 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 KNSTRNQ9Y448 316 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 OTOFQ9HC10 1997 aa9.21□□□□□ -0.94
H3F3A-201ENST00000366813 PFASO15067 1338 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 ZC3H12DA2A288 527 aaKnown RBP9.2□□□□□ -0.94
H3F3A-201ENST00000366813 PDHXO00330 501 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 MRE11P49959 708 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 PRR5P85299 388 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 SHHQ15465 462 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 CFAP100Q494V2 611 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 EEF1DP3Q658K8 133 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 POMZP3Q6PJE2 187 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 JAZF1Q86VZ6 243 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 TRIM59Q8IWR1 403 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 LRRC47Q8N1G4 583 aaKnown RBP9.2□□□□□ -0.94
H3F3A-201ENST00000366813 CRACR2BQ8N4Y2 399 aaPredicted RBP9.2□□□□□ -0.94
H3F3A-201ENST00000366813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.2□□□□□ -0.94
H3F3A-201ENST00000366813 P2RX7Q99572 595 aaKnown RBP9.2□□□□□ -0.94
H3F3A-201ENST00000366813 HCFC2Q9Y5Z7 792 aa9.2□□□□□ -0.94
H3F3A-201ENST00000366813 MYO1BO43795 1136 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 VAMP4O75379 141 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 CAPNS1P04632 268 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 GRB10Q13322 594 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 LRRC26Q2I0M4 334 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 DPY19L1Q2PZI1 675 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 C9orf50Q5SZB4 431 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 CABP7Q86V35 215 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 SYT8Q8NBV8 401 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 LBHD1Q9BQE6 289 aaPredicted RBP9.19□□□□□ -0.94
H3F3A-201ENST00000366813 KRTAP4-2Q9BYR5 136 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 COA1Q9GZY4 146 aa9.19□□□□□ -0.94
H3F3A-201ENST00000366813 LUC7LQ9NQ29 371 aaKnown RBP9.19□□□□□ -0.94
H3F3A-201ENST00000366813 MED23Q9ULK4 1368 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 TLDC2A0PJX2 215 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 TBX1O43435 398 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 KCNH1O95259 989 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 CYP2C8P10632 490 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 SEPHS1P49903 392 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 PPP2R2AP63151 447 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 MRPS5P82675 430 aaKnown RBP9.18□□□□□ -0.94
H3F3A-201ENST00000366813 FOXO4P98177 505 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 ANKRD23Q86SG2 305 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 ERO1BQ86YB8 467 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 CERS5Q8N5B7 392 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.18□□□□□ -0.94
H3F3A-201ENST00000366813 CXorf38Q8TB03 319 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 THAP3Q8WTV1 239 aaPredicted RBP9.18□□□□□ -0.94
H3F3A-201ENST00000366813 ZKSCAN4Q969J2 545 aaPredicted RBP9.18□□□□□ -0.94
H3F3A-201ENST00000366813 TEPSINQ96N21 525 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 THEGQ9P2T0 379 aa9.18□□□□□ -0.94
H3F3A-201ENST00000366813 IGFBP6P24592 240 aaPredicted RBP9.17□□□□□ -0.94
H3F3A-201ENST00000366813 KLRK1P26718 216 aa9.17□□□□□ -0.94
H3F3A-201ENST00000366813 KCNC1P48547 511 aa9.17□□□□□ -0.94
H3F3A-201ENST00000366813 SMAD3P84022 425 aaKnown RBP9.17□□□□□ -0.94
H3F3A-201ENST00000366813 C2orf27AQ580R0 203 aa9.17□□□□□ -0.94
H3F3A-201ENST00000366813 RCSD1Q6JBY9 416 aa9.17□□□□□ -0.94
H3F3A-201ENST00000366813 RNPC3Q96LT9 517 aaKnown RBP9.17□□□□□ -0.94
H3F3A-201ENST00000366813 TMEM39BQ9GZU3 492 aa9.17□□□□□ -0.94
H3F3A-201ENST00000366813 ARHGEF4Q9NR80 690 aa9.17□□□□□ -0.94
H3F3A-201ENST00000366813 MRPL42Q9Y6G3 142 aaKnown RBP9.17□□□□□ -0.94
H3F3A-201ENST00000366813 DDX60LQ5H9U9 1706 aaKnown RBP9.17□□□□□ -0.94
H3F3A-201ENST00000366813 COL3A1P02461 1466 aaPredicted RBP9.17□□□□□ -0.94
H3F3A-201ENST00000366813 ADAMTS20P59510 1910 aa9.17□□□□□ -0.94
H3F3A-201ENST00000366813 DNAH12Q6ZR08 3092 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 TNPO2O14787 897 aaKnown RBP9.16□□□□□ -0.94
H3F3A-201ENST00000366813 AURKAO14965 403 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 HTATSF1O43719 755 aaKnown RBP9.16□□□□□ -0.94
H3F3A-201ENST00000366813 FAM153BP0C7A2 387 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 NCAM1P13591 858 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 RBM5P52756 815 aaKnown RBP eCLIP9.16□□□□□ -0.94
H3F3A-201ENST00000366813 PPIL2Q13356 520 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 HSP90AA2PQ14568 343 aaPredicted RBP9.16□□□□□ -0.94
H3F3A-201ENST00000366813 TMEM31Q5JXX7 168 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 GTF2IRD2BQ6EKJ0 949 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 GTF2IRD2Q86UP8 949 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 ANKRD18AQ8IVF6 992 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 ZBTB38Q8NAP3 1195 aaPredicted RBP9.16□□□□□ -0.94
H3F3A-201ENST00000366813 USP33Q8TEY7 942 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 PNISRQ8TF01 805 aaKnown RBP9.16□□□□□ -0.94
H3F3A-201ENST00000366813 BTN2A2Q8WVV5 523 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 ALG3Q92685 438 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 ISCA1Q9BUE6 129 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 KANSL2Q9H9L4 492 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 OGDHLQ9ULD0 1010 aa9.16□□□□□ -0.94
H3F3A-201ENST00000366813 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
H3F3A-201ENST00000366813 C2orf71A6NGG8 1288 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms