RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 MYO1BO43795 1136 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 NPHS1O60500 1241 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 NAT1P18440 290 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 HK2P52789 917 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 HUNKP57058 714 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 PLCL1Q15111 1095 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 LRRTM3Q86VH5 581 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 RPAP2Q8IXW5 612 aaPredicted RBP9.42□□□□□ -0.9
YBX3-204ENST00000366290 C2orf69Q8N8R5 385 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 ANKS4BQ8N8V4 417 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 WDR66Q8TBY9 1149 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 GPATCH3Q96I76 525 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 JMJD8Q96S16 334 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 JAG2Q9Y219 1238 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 NOP58Q9Y2X3 529 aaKnown RBP9.42□□□□□ -0.9
YBX3-204ENST00000366290 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
YBX3-204ENST00000366290 TNPO3Q9Y5L0 923 aaKnown RBP9.42□□□□□ -0.9
YBX3-204ENST00000366290 MAST3O60307 1309 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 AOX1Q06278 1338 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 A0A1W2PQ45 241 aaPredicted RBP9.41□□□□□ -0.9
YBX3-204ENST00000366290 A0A1W2PQY0 241 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 TCRBV16S1A1N1A0A5B0 115 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 F8W031 263 aaPredicted RBP9.41□□□□□ -0.9
YBX3-204ENST00000366290 OPA1O60313 960 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 TAL1P17542 331 aaPredicted RBP9.41□□□□□ -0.9
YBX3-204ENST00000366290 RTP1P59025 263 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 TFCP2Q12800 502 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 NOGQ13253 232 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 ZNF460Q14592 562 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 PTPROQ16827 1216 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 FKBP1CQ5VVH2 108 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 RGMBQ6NW40 437 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 CNNM4Q6P4Q7 775 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 HHIPL2Q6UWX4 724 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 THNSL2Q86YJ6 484 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 CCDC120Q96HB5 630 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 TARS2Q9BW92 718 aaKnown RBP9.41□□□□□ -0.9
YBX3-204ENST00000366290 DEFB129Q9H1M3 183 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 GPR108Q9NPR9 543 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 GNL3LQ9NVN8 582 aaKnown RBP9.41□□□□□ -0.9
YBX3-204ENST00000366290 PCDHAC2Q9Y5I4 1007 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 TIMM13Q9Y5L4 95 aaPredicted RBP9.41□□□□□ -0.9
YBX3-204ENST00000366290 LAMB1P07942 1786 aa9.41□□□□□ -0.9
YBX3-204ENST00000366290 A0A1B0GUL7 405 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 FRAT2O75474 233 aaPredicted RBP9.4□□□□□ -0.9
YBX3-204ENST00000366290 ASLP04424 464 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 APPP05067 770 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 ADORA1P30542 326 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 IGFALSP35858 605 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 PHKA1P46020 1223 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 TIMM10P62072 90 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 RPL11P62913 178 aaKnown RBP9.4□□□□□ -0.9
YBX3-204ENST00000366290 KIF23Q02241 960 aaPredicted RBP9.4□□□□□ -0.9
YBX3-204ENST00000366290 CHRNEQ04844 493 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 G3BP1Q13283 466 aaKnown RBP eCLIP9.4□□□□□ -0.9
YBX3-204ENST00000366290 TNFAIP1Q13829 316 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 APOBEC3HQ6NTF7 200 aaKnown RBP9.4□□□□□ -0.9
YBX3-204ENST00000366290 CBLL1Q75N03 491 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 TP53INP2Q8IXH6 220 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 AGBL5Q8NDL9 886 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 PDZD8Q8NEN9 1154 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 TEKT1Q969V4 418 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 ALG1Q9BT22 464 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 ADAMTS6Q9UKP5 1117 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 DENND2AQ9ULE3 1009 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 SSC5DA1L4H1 1573 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 AKAP11Q9UKA4 1901 aa9.4□□□□□ -0.9
YBX3-204ENST00000366290 MYH2Q9UKX2 1941 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 GSG1L2A8MUP6 293 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 ARVCFO00192 962 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 NF2P35240 595 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 STAT3P40763 770 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 BCL6P41182 706 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 GTF2A2P52657 109 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 CHAF1AQ13111 956 aaPredicted RBP9.39□□□□□ -0.91
YBX3-204ENST00000366290 LSAMPQ13449 338 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 SLC14A2Q15849 920 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 KIZQ2M2Z5 673 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 HSF5Q4G112 596 aaPredicted RBP9.39□□□□□ -0.91
YBX3-204ENST00000366290 DPF3Q92784 378 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 CHAMP1Q96JM3 812 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 GULP1Q9UBP9 304 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 ZNF70Q9UC06 446 aaPredicted RBP9.39□□□□□ -0.91
YBX3-204ENST00000366290 SCAF8Q9UPN6 1271 aaKnown RBP9.39□□□□□ -0.91
YBX3-204ENST00000366290 COL4A3BPQ9Y5P4 624 aa9.39□□□□□ -0.91
YBX3-204ENST00000366290 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 CLRN2A0PK11 232 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 SURF6O75683 361 aaKnown RBP9.38□□□□□ -0.91
YBX3-204ENST00000366290 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
YBX3-204ENST00000366290 PAK1Q13153 545 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
YBX3-204ENST00000366290 SUPT20HL1Q3ZLR7 823 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 PRAMEF18Q5VWM3 479 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 SPPL2CQ8IUH8 684 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms