RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ABHD15Q6UXT9 468 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 ELOA2Q8IYF1 753 aaPredicted RBP6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 CMTM4Q8IZR5 234 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 OR14C36Q8NHC7 312 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 C14orf119Q9NWQ9 140 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 DPP7Q9UHL4 492 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 A0A1W2PR48 441 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 GPR39O43194 453 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 DGCR2P98153 550 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 HHEXQ03014 270 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 FSCN1Q16658 493 aaKnown RBP6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 LMBR1Q8WVP7 490 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 FAM89AQ96GI7 184 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 QRSL1Q9H0R6 528 aaKnown RBP6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 PRKAB1Q9Y478 270 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 CDY2AQ9Y6F7 541 aa6.32□□□□□ -1.4
RNU4-28P-201ENST00000364739 ENPP1P22413 925 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 NPEPPSP55786 919 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 ELAVL1Q15717 326 aaKnown RBP6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 Q6ZRM9 215 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 TAS1R1Q7RTX1 841 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 DDX42Q86XP3 938 aaKnown RBP eCLIP6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 C1orf210Q8IVY1 113 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 UNC5BQ8IZJ1 945 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 OR5M3Q8NGP4 307 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 ARL8AQ96BM9 186 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 ZNF512Q96ME7 567 aaPredicted RBP6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 SPC25Q9HBM1 224 aa6.31□□□□□ -1.4
RNU4-28P-201ENST00000364739 NRP2O60462 931 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 PRAMEF4O60810 478 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 DNAJC6O75061 913 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 GPR15P49685 360 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 NRG3P56975 720 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 MB21D1Q8N884 522 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 PGBD4Q96DM1 585 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 AHCYL2Q96HN2 611 aaKnown RBP6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 MPHOSPH9Q99550 1183 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 WNT8AQ9H1J5 351 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 MSL2Q9HCI7 577 aa6.3□□□□□ -1.4
RNU4-28P-201ENST00000364739 TMEM127O75204 238 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 C1SP09871 688 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 CPEP16870 476 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 GPR3P46089 330 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 SCNN1GP51170 649 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 SRSF2Q01130 221 aaKnown RBP6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 SPIDRQ14159 915 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 RRP1BQ14684 758 aaKnown RBP6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 GLB1L2Q8IW92 636 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 GSPT2Q8IYD1 628 aaKnown RBP6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 ZNF747Q9BV97 191 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 TRIM8Q9BZR9 551 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 EPC1Q9H2F5 836 aa6.29□□□□□ -1.4
RNU4-28P-201ENST00000364739 MTSS1O43312 755 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 AKAP8O43823 692 aaKnown RBP6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 PTTG1IPP53801 180 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 EVA1CP58658 441 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 ZXDAP98168 799 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 CRHR2Q13324 411 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 CCDC178Q5BJE1 867 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 RNF207Q6ZRF8 634 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 SPATS2Q86XZ4 545 aaKnown RBP6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 XYLT1Q86Y38 959 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 THEMISQ8N1K5 641 aaPredicted RBP6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 TSPEARQ8WU66 669 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 RSAD2Q8WXG1 361 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 MIEF2Q96C03 454 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 ENKD1Q9H0I2 346 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 VPS11Q9H270 941 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 GIT1Q9Y2X7 761 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 ZMYM3Q14202 1370 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 PHLDB1Q86UU1 1377 aa6.28□□□□□ -1.4
RNU4-28P-201ENST00000364739 LTA4HP09960 611 aaKnown RBP6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 HK1P19367 917 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 CTSSP25774 331 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 ACRV1P26436 265 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 ADSLP30566 484 aaPredicted RBP6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 DUSP2Q05923 314 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 FOXE3Q13461 319 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 RNF219Q5W0B1 726 aaPredicted RBP6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 IGFL4Q6B9Z1 124 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 Q8N1X5 172 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 LILRA3Q8N6C8 439 aaPredicted RBP6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 ATXN2LQ8WWM7 1075 aaKnown RBP6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 PLEKHG4BQ96PX9 1271 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 SLC2A13Q96QE2 648 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 ZNF341Q9BYN7 854 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 CSRNP2Q9H175 543 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 ATP8A1Q9Y2Q0 1164 aa6.27□□□□□ -1.41
RNU4-28P-201ENST00000364739 FSHBP01225 129 aa6.26□□□□□ -1.41
RNU4-28P-201ENST00000364739 OSMP13725 252 aa6.26□□□□□ -1.41
RNU4-28P-201ENST00000364739 ERVK-21P61565 698 aa6.26□□□□□ -1.41
RNU4-28P-201ENST00000364739 RNF187Q5TA31 235 aaPredicted RBP6.26□□□□□ -1.41
RNU4-28P-201ENST00000364739 KCNK18Q7Z418 384 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms