RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 NAGPAQ9UK23 515 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 RASA4BC9J798 803 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 TRIM66O15016 1216 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 RASA4O43374 803 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 ANXA13P27216 316 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 MAPK6Q16659 721 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 PPP4R1Q8TF05 950 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 HEXIM2Q96MH2 286 aaKnown RBP17.48■□□□□ 0.39
SCAF1-201ENST00000360565 VCPKMTQ9H867 229 aa17.48■□□□□ 0.39
SCAF1-201ENST00000360565 JCADQ9P266 1359 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 M0QZ92 97 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 SSTR3P32745 418 aaPredicted RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 CDO1Q16878 200 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 POLR3FQ9H1D9 316 aaPredicted RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 LRRIQ3A6PVS8 624 aaPredicted RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 SCP2P22307 547 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 DHX34Q14147 1143 aaKnown RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 SURF1Q15526 300 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 MUM1Q2TAK8 710 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 KIAA1755Q5JYT7 1200 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 HP1BP3Q5SSJ5 553 aaPredicted RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 PRPSAP2O60256 369 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 RTN2O75298 545 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 GYS1P13807 737 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 GNA15P30679 374 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 SCYL3Q8IZE3 742 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 CFAP61Q8NHU2 1237 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 RBM41Q96IZ5 413 aaKnown RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 DUSP9Q99956 384 aaKnown RBP17.47■□□□□ 0.39
SCAF1-201ENST00000360565 PITPNM3Q9BZ71 974 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 FBXO28Q9NVF7 368 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
SCAF1-201ENST00000360565 IRAK1P51617 712 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 LRRC14Q15048 493 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 FAM47CQ5HY64 1035 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 DPP9Q86TI2 863 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
SCAF1-201ENST00000360565 ANKZF1Q9H8Y5 726 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 GINM1Q9NU53 330 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 BRAFP15056 766 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 SAT1P21673 171 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 CA8P35219 290 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 CASP4P49662 377 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 SLC12A2P55011 1212 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-201ENST00000360565 TAF12Q16514 161 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 RUSC1Q9BVN2 902 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 HOXC10Q9NYD6 342 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 CHORDC1Q9UHD1 332 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-201ENST00000360565 GUCY2CP25092 1073 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 GPD1LQ8N335 351 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 CCNYQ8ND76 341 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 EFCC1Q9HA90 598 aa17.46■□□□□ 0.39
SCAF1-201ENST00000360565 RBAKQ9NYW8 714 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-201ENST00000360565 AGO2Q9UKV8 859 aaKnown RBP17.46■□□□□ 0.39
SCAF1-201ENST00000360565 GOLGA8MH3BSY2 632 aa17.46■□□□□ 0.38
SCAF1-201ENST00000360565 PLS3P13797 630 aa17.46■□□□□ 0.38
SCAF1-201ENST00000360565 FGFR4P22455 802 aa17.46■□□□□ 0.38
SCAF1-201ENST00000360565 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.38
SCAF1-201ENST00000360565 EZH2Q15910 746 aaKnown RBP17.46■□□□□ 0.38
SCAF1-201ENST00000360565 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.38
SCAF1-201ENST00000360565 CDKL2Q92772 493 aa17.46■□□□□ 0.38
SCAF1-201ENST00000360565 NUDT12Q9BQG2 462 aa17.46■□□□□ 0.38
SCAF1-201ENST00000360565 PACSIN1Q9BY11 444 aa17.46■□□□□ 0.38
SCAF1-201ENST00000360565 TXNDC9O14530 226 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 SLC26A4O43511 780 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 MDH1P40925 334 aaKnown RBP17.45■□□□□ 0.38
SCAF1-201ENST00000360565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■■■■■ 50.8
SCAF1-201ENST00000360565 HSPH1Q92598 858 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 MTRQ99707 1265 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 MKNK1Q9BUB5 465 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 RPAP3Q9H6T3 665 aaPredicted RBP17.45■□□□□ 0.38
SCAF1-201ENST00000360565 PSD3Q9NYI0 1048 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 ALG6Q9Y672 507 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 LRRC10BA6NIK2 292 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 H3BQF6 201 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 CPP00450 1065 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 EXOC8Q8IYI6 725 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 MORC4Q8TE76 937 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 SCFD1Q8WVM8 642 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 NLRP7Q8WX94 980 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 CALR3Q96L12 384 aaKnown RBP17.45■□□□□ 0.38
SCAF1-201ENST00000360565 ZNF302Q9NR11 478 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 EIF3HO15372 352 aaKnown RBP eCLIP17.45■□□□□ 0.382e-9■■□□□ 12.6
SCAF1-201ENST00000360565 BAG2O95816 211 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 NPEPPSP55786 919 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 IFRD2Q12894 506 aaPredicted RBP17.45■□□□□ 0.38
SCAF1-201ENST00000360565 RCN2Q14257 317 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 ZNF699Q32M78 642 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 PLA2G4FQ68DD2 849 aa17.45■□□□□ 0.38
SCAF1-201ENST00000360565 CDK17Q00537 523 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 PSMD6Q15008 389 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 SNRNP35Q16560 246 aaKnown RBP17.44■□□□□ 0.38
SCAF1-201ENST00000360565 ENOSF1Q7L5Y1 443 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms