RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 FAM160B2Q86V87 743 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CCDC116Q8IYX3 515 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF444Q8N0Y2 327 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 FANCBQ8NB91 859 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 RAPGEF5Q92565 580 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 PRCCQ92733 491 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 DTNBP1Q96EV8 351 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ZBED3Q96IU2 234 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CTAGE1Q96RT6 745 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 SYT15Q9BQS2 421 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 NFU1Q9UMS0 254 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 PPME1Q9Y570 386 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 PARP14Q460N5 1801 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ITIH6Q6UXX5 1313 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ANO9A1A5B4 782 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 F8W031 263 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PDLIM1O00151 329 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 KRT86O43790 486 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 LGR5O75473 907 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 MMP1P03956 469 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ERCC5P28715 1186 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 TNFRSF8P28908 595 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 CCT6AP40227 531 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 CARSP49589 748 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 SARSP49591 514 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 GMPSP49915 693 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PLCD1P51178 756 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 GUCY2FP51841 1108 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 STX17P56962 302 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 HERVK_113P62684 666 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 KCNJ2P63252 427 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 FKBP1BP68106 108 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 MRPS35P82673 323 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ENPEPQ07075 957 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 SFSWAPQ12872 951 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 DYNC1I2Q13409 638 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ADAM9Q13443 819 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 RASA3Q14644 834 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ARHGEF6Q15052 776 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ENOX2Q16206 610 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 NTRK3Q16288 839 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PFKFB3Q16875 520 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ODF2Q5BJF6 829 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 IFIT1BQ5T764 474 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 RNF220Q5VTB9 566 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 SPATA1Q5VX52 437 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 HAUS3Q68CZ6 603 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 TMEM179Q6ZVK1 233 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 TMTC3Q6ZXV5 915 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 APLFQ8IW19 511 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF654Q8IZM8 581 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 CRACR2BQ8N4Y2 399 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 IFT81Q8WYA0 676 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 TANGO6Q9C0B7 1094 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PHACTR1Q9C0D0 580 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 KANSL2Q9H9L4 492 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 MKNK2Q9HBH9 465 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 TMBIM4Q9HC24 238 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 AATFQ9NY61 560 aaKnown RBP eCLIP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ZNRF3Q9ULT6 936 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PHF24Q9UPV7 400 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 DUSP10Q9Y6W6 482 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 KLF18A0A0U1RQI7 1052 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PALM3A6NDB9 673 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 C6orf229H3BNL8 230 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ABLIM1O14639 778 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 GLI1P08151 1106 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PDHA1P08559 390 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 NQO1P15559 274 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 DRD4P21917 467 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 KRT2P35908 639 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ALDH5A1P51649 535 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 OAZ1P54368 228 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ANTXR2P58335 489 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 LBRQ14739 615 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PTPAQ15257 358 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 PABPC1LQ4VXU2 614 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 FAM133BQ5BKY9 247 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 DACT2Q5SW24 774 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 CDKAL1Q5VV42 579 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 KLHL10Q6JEL2 608 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 C8orf74Q6P047 294 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 RSBN1LQ6PCB5 846 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 CCDC129Q6ZRS4 1044 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 TSHZ1Q6ZSZ6 1077 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 CHST3Q7LGC8 479 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 NIPA1Q7RTP0 329 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF572Q7Z3I7 529 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 BPHLQ86WA6 291 aaPredicted RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 APOBEC3FQ8IUX4 373 aaKnown RBP4.32□□□□□ -1.72
CNGA1-201ENST00000358519 IFT20Q8IY31 132 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 GRAMD1CQ8IYS0 662 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 LCORLQ8N3X6 602 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 MREGQ8N565 214 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 ANKS4BQ8N8V4 417 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 CCDC197Q8NCU1 140 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 MIPOL1Q8TD10 442 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 FAM151AQ8WW52 585 aa4.32□□□□□ -1.72
CNGA1-201ENST00000358519 MAIP1Q8WWC4 291 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms