RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 EPM2AIP1Q7L775 607 aaPredicted RBP16.35■□□□□ 0.21
CCNE1-202ENST00000357943 CATSPER4Q7RTX7 472 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 SCFD1Q8WVM8 642 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 BADQ92934 168 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 IFIH1Q9BYX4 1025 aaKnown RBP16.35■□□□□ 0.21
CCNE1-202ENST00000357943 PRMT7Q9NVM4 692 aaPredicted RBP16.35■□□□□ 0.21
CCNE1-202ENST00000357943 MAPK8IP1Q9UQF2 711 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 ACKR2O00590 384 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 TSPAN1O60635 241 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 PARNO95453 639 aaKnown RBP16.34■□□□□ 0.21
CCNE1-202ENST00000357943 CXCL10P02778 98 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 HOXD13P35453 343 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 MORC3Q14149 939 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 FAM187BQ17R55 369 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 PLEKHG4Q58EX7 1191 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 MAP4K3Q8IVH8 894 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 TMEM199Q8N511 208 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 IKZF4Q9H2S9 585 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 ERVK-5Q9HDB9 667 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 TANC1Q9C0D5 1861 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 GPR182O15218 404 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 EIF3DO15371 548 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCNE1-202ENST00000357943 ERLIN2O94905 339 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 HOXA11P31270 313 aaPredicted RBP16.34■□□□□ 0.21
CCNE1-202ENST00000357943 STRN3Q13033 797 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 TCTN1Q2MV58 587 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 L1TD1Q5T7N2 865 aaKnown RBP16.34■□□□□ 0.21
CCNE1-202ENST00000357943 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 CPB2Q96IY4 423 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 PRIMPOLQ96LW4 560 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 NR2E3Q9Y5X4 410 aa16.34■□□□□ 0.21
CCNE1-202ENST00000357943 ARF4P18085 180 aaPredicted RBP16.33■□□□□ 0.2
CCNE1-202ENST00000357943 SCP2P22307 547 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 RFC2P35250 354 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 PRCPP42785 496 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 PRPF4BQ13523 1007 aaKnown RBP16.33■□□□□ 0.2
CCNE1-202ENST00000357943 ALCAMQ13740 583 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 PCBP1Q15365 356 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCNE1-202ENST00000357943 CDR2LQ86X02 465 aaPredicted RBP16.33■□□□□ 0.2
CCNE1-202ENST00000357943 NELFCDQ8IXH7 590 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 TRIML1Q8N9V2 468 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 ZNF507Q8TCN5 953 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 TARS2Q9BW92 718 aaKnown RBP16.33■□□□□ 0.2
CCNE1-202ENST00000357943 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 PIN4Q9Y237 131 aaKnown RBP16.33■□□□□ 0.2
CCNE1-202ENST00000357943 SCN5AQ14524 2016 aa16.33■□□□□ 0.2
CCNE1-202ENST00000357943 ACRP10323 421 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 ABCD1P33897 745 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 BMT2Q1RMZ1 405 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 STXBP4Q6ZWJ1 553 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 MYOCDQ8IZQ8 938 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 HVCN1Q96D96 273 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 ACCSQ96QU6 501 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 MRPL4Q9BYD3 311 aaKnown RBP16.32■□□□□ 0.2
CCNE1-202ENST00000357943 TET1Q8NFU7 2136 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 CNTNAP2Q9UHC6 1331 aa16.32■□□□□ 0.2
CCNE1-202ENST00000357943 TISP43B9A030 160 aa16.31■□□□□ 0.2
CCNE1-202ENST00000357943 MGEA5O60502 916 aa16.31■□□□□ 0.2
CCNE1-202ENST00000357943 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
CCNE1-202ENST00000357943 FPGSQ05932 587 aa16.31■□□□□ 0.2
CCNE1-202ENST00000357943 SEPT8Q92599 483 aa16.31■□□□□ 0.2
CCNE1-202ENST00000357943 BICD1Q96G01 975 aa16.31■□□□□ 0.2
CCNE1-202ENST00000357943 ACO2Q99798 780 aaKnown RBP16.31■□□□□ 0.2
CCNE1-202ENST00000357943 TMEM206Q9H813 350 aa16.31■□□□□ 0.2
CCNE1-202ENST00000357943 ZMYM2Q9UBW7 1377 aa16.31■□□□□ 0.2
CCNE1-202ENST00000357943 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 SYCE3A1L190 88 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 HNRNPDLO14979 420 aaKnown RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 EPHB4P54760 987 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■□□□□ 10.6
CCNE1-202ENST00000357943 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 DPCR1Q3MIW9 517 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 ZSCAN23Q3MJ62 389 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 ATF7IP2Q5U623 682 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 SLC39A4Q6P5W5 647 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 C16orf59Q7L2K0 433 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 RPUSD2Q8IZ73 545 aaKnown RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 SYCP3Q8IZU3 236 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 ADSSL1Q8N142 457 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 GUF1Q8N442 669 aaKnown RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 ZBTB45Q96K62 511 aaPredicted RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 UBE4BO95155 1302 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 LTBP2Q14767 1821 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 PPP1R3GB7ZBB8 358 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 ANKRD63C9JTQ0 380 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 TGFB1I1O43294 461 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 PIGRP01833 764 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 AXLP30530 894 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 LIG4P49917 911 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 NLRP12P59046 1061 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 KNOP1Q1ED39 458 aaKnown RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 EEF1DP3Q658K8 133 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 NOTUMQ6P988 496 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms