RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 POLR3CQ9BUI4 534 aaPredicted RBP25.52■■□□□ 1.68
NPAS3-203ENST00000357798 MOV10L1Q9BXT6 1211 aaKnown RBP25.52■■□□□ 1.68
NPAS3-203ENST00000357798 CTTNBP2NLQ9P2B4 639 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 PCDHA1Q9Y5I3 950 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 NEBLO76041 1014 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 GJB6O95452 261 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 PPP2R5AQ15172 486 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 SERPINB12Q96P63 405 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 FGFR1OP2Q9NVK5 253 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 RABGAP1Q9Y3P9 1069 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 UBE4BO95155 1302 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 TCP11X1B4DZS4 312 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 ATP5DP30049 168 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 COILP38432 576 aaPredicted RBP25.51■■□□□ 1.67
NPAS3-203ENST00000357798 CBWD6Q4V339 395 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 CCDC38Q502W7 563 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 CBWD3Q5JTY5 395 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 CBWD5Q5RIA9 395 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 MFSD14BQ5SR56 506 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 LENG9Q96B70 501 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 ARHGEF3Q9NR81 526 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 ARL2BPQ9Y2Y0 163 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 NRAPQ86VF7 1730 aa25.51■■□□□ 1.67
NPAS3-203ENST00000357798 MARCKSL1P49006 195 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 PEX5P50542 639 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 ZNF622Q969S3 477 aaKnown RBP eCLIP25.5■■□□□ 1.67
NPAS3-203ENST00000357798 KLHL29Q96CT2 875 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 WNT8AQ9H1J5 351 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 BCAS3Q9H6U6 928 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 MTUS1Q9ULD2 1270 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 ECM2O94769 699 aaPredicted RBP25.5■■□□□ 1.67
NPAS3-203ENST00000357798 MYL7Q01449 175 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 MEIS2O14770 477 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 RPS6KA4O75676 772 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 DAGLAQ9Y4D2 1042 aa25.5■■□□□ 1.67
NPAS3-203ENST00000357798 ANKRD63C9JTQ0 380 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 FAM13AO94988 1023 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 RC3H1Q5TC82 1133 aaKnown RBP25.49■■□□□ 1.67
NPAS3-203ENST00000357798 RINT1Q6NUQ1 792 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 BZW1Q7L1Q6 419 aaKnown RBP25.49■■□□□ 1.67
NPAS3-203ENST00000357798 KIRREL3Q8IZU9 778 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 C12orf50Q8NA57 414 aaPredicted RBP25.49■■□□□ 1.67
NPAS3-203ENST00000357798 ARHGEF2Q92974 986 aaKnown RBP25.49■■□□□ 1.67
NPAS3-203ENST00000357798 VAV3Q9UKW4 847 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 TMEM120BA0PK00 339 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 GPC5P78333 572 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 GPSM2P81274 684 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 PICALMQ13492 652 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 ARHGAP44Q17R89 818 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 VSTM1Q6UX27 236 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 SPATA21Q7Z572 469 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 CCDC105Q8IYK2 499 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 RXFP1Q9HBX9 757 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 DMAC2Q9NW81 257 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 SERPINB13Q9UIV8 391 aa25.49■■□□□ 1.67
NPAS3-203ENST00000357798 MTA2O94776 668 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 ASRGL1Q7L266 308 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 CKAP2Q8WWK9 683 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 CNKSR1Q969H4 720 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 VTI1AQ96AJ9 217 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 USP40Q9NVE5 1235 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 FRMD4BQ9Y2L6 1034 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 NMT1P30419 496 aaKnown RBP25.48■■□□□ 1.67
NPAS3-203ENST00000357798 MAP2K1Q02750 393 aaPredicted RBP25.48■■□□□ 1.67
NPAS3-203ENST00000357798 CYP4A11Q02928 519 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 MKRN3Q13064 507 aaKnown RBP25.48■■□□□ 1.67
NPAS3-203ENST00000357798 LRRC14Q15048 493 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 SLC13A5Q86YT5 568 aaPredicted RBP25.48■■□□□ 1.67
NPAS3-203ENST00000357798 ZNF570Q96NI8 536 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 CDC42EP4Q9H3Q1 356 aaKnown RBP25.48■■□□□ 1.67
NPAS3-203ENST00000357798 PRKAG3Q9UGI9 489 aa25.48■■□□□ 1.67
NPAS3-203ENST00000357798 PPP1R12AO14974 1030 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-203ENST00000357798 UFL1O94874 794 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 FTLP02792 175 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-203ENST00000357798 KRT16P08779 473 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 COMTP21964 271 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 ATP2B4P23634 1241 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 KCNQ4P56696 695 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 CALCOCO2Q13137 446 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 HS2ST1Q7LGA3 356 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 EIF2AK1Q9BQI3 630 aaKnown RBP25.47■■□□□ 1.67
NPAS3-203ENST00000357798 IKZF4Q9H2S9 585 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 ZNF335Q9H4Z2 1342 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-203ENST00000357798 TMEM110-MUSTN1A8MSY1 372 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 FOXN3O00409 490 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-203ENST00000357798 SHMT1P34896 483 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 ZKSCAN8Q15776 578 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-203ENST00000357798 LONRF1Q17RB8 773 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 NUGGCQ68CJ6 796 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 MYCT1Q8N699 235 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 MGARPQ8TDB4 240 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 CD101Q93033 1021 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 P2RX7Q99572 595 aaKnown RBP25.47■■□□□ 1.67
NPAS3-203ENST00000357798 GGT7Q9UJ14 662 aa25.47■■□□□ 1.67
NPAS3-203ENST00000357798 TRIM49P0CI25 452 aa25.46■■□□□ 1.67
NPAS3-203ENST00000357798 TRIM49CP0CI26 452 aa25.46■■□□□ 1.67
NPAS3-203ENST00000357798 BCRP11274 1271 aa25.46■■□□□ 1.67
NPAS3-203ENST00000357798 SKIV2L2P42285 1042 aaKnown RBP25.46■■□□□ 1.67
NPAS3-203ENST00000357798 SATB1Q01826 763 aa25.46■■□□□ 1.67
NPAS3-203ENST00000357798 RRP1BQ14684 758 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms