RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 MUC13Q9H3R2 512 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 CENPBD1B2RD01 187 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 ECDO95905 644 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-203ENST00000357395 STX5Q13190 355 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 MTA1Q13330 715 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 SGO2Q562F6 1265 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 ARHGEF19Q8IW93 802 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 SAMD3Q8N6K7 520 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 FBXL13Q8NEE6 735 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 TROQ12816 1431 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-203ENST00000357395 RNF103-CHMP3A0A140T963 221 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 EXOC3O60645 756 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 EPC2Q52LR7 807 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.95□□□□□ -1.62
SYNE2-203ENST00000357395 UQCRBP14927 111 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 EIF5AP63241 154 aaKnown RBP4.95□□□□□ -1.62
SYNE2-203ENST00000357395 GUCY2DQ02846 1103 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 TMEM154Q6P9G4 183 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 CCT8L2Q96SF2 557 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 MAGEB3O15480 346 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 MYLK4Q86YV6 388 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-203ENST00000357395 PSMC3P17980 439 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 BRCC3P46736 316 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 PPP3CCP48454 512 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 SARSP49591 514 aaKnown RBP4.95□□□□□ -1.62
SYNE2-203ENST00000357395 ARL4CP56559 192 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 ARHGEF16Q5VV41 709 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 DCUN1D2Q6PH85 259 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 NYAP1Q6ZVC0 841 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 PCDH18Q9HCL0 1135 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 SERPINA10Q9UK55 444 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 TAF4O00268 1085 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 CMPK2Q5EBM0 449 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 NLRP4Q96MN2 994 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 FAM213AQ9BRX8 229 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 FICDQ9BVA6 458 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 A0A1W2PRG6 482 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 CCT8L1PA6NM43 557 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 DGUOKQ16854 277 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 C15orf40Q8WUR7 153 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 C12orf66Q96MD2 445 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 DDX28Q9NUL7 540 aaKnown RBP4.95□□□□□ -1.62
SYNE2-203ENST00000357395 PCDHB13Q9Y5F0 798 aa4.95□□□□□ -1.62
SYNE2-203ENST00000357395 PDZK1P1A8MUH7 402 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ATF6P18850 670 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ADCY8P40145 1251 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 TRAP1Q12931 704 aaKnown RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 MTHFD1LQ6UB35 978 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 BCL7BQ9BQE9 202 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 TEKT3Q9BXF9 490 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 SNX9Q9Y5X1 595 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 CCDC61Q9Y6R9 512 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 EXOC1LA0A1B0GW35 172 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 TOP3BO95985 862 aaKnown RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 HSPD1P10809 573 aaKnown RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 GRIK1P39086 918 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 KPNA1P52294 538 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 KYAT1Q16773 422 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 SMYD4Q8IYR2 804 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ZNF555Q8NEP9 628 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 EURLQ9NYK6 297 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 KCND2Q9NZV8 630 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 LRP2BPQ9P2M1 347 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 FAM45BPQ6NSW5 357 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 DACT3Q96B18 629 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 TRIM51Q9BSJ1 452 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 CNNM1Q9NRU3 951 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 DNALI1O14645 258 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 VPS4BO75351 444 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 NAB1Q13506 487 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 KRT40Q6A162 431 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 BTBD6Q96KE9 485 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 SH3GLB2Q9NR46 395 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 RAB21Q9UL25 225 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 MYOM2P54296 1465 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 MYO1FO00160 1098 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ITIH2P19823 946 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ARHGEF6Q15052 776 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 FAM92BQ6ZTR7 304 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 USP13Q92995 863 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 FAM47DPA6NHR8 397 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 RANBP6O60518 1105 aaKnown RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 NPTXRO95502 500 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 CCNCP24863 283 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 MLH1P40692 756 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ADARP55265 1226 aaKnown RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 GRSF1Q12849 480 aaKnown RBP eCLIP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ZNF444Q8N0Y2 327 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 GALNT15Q8N3T1 639 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 GAPVD1Q14C86 1478 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ATP10DQ9P241 1426 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 GADD45BO75293 160 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 HLA-DOAP06340 250 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 SCRN1Q12765 414 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 ADCK5Q3MIX3 580 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 XPO4Q9C0E2 1151 aaKnown RBP4.94□□□□□ -1.62
SYNE2-203ENST00000357395 SMURF2Q9HAU4 748 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 TAC1P20366 129 aa4.94□□□□□ -1.62
SYNE2-203ENST00000357395 E2F5Q15329 346 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms