RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 AGR3Q8TD06 166 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 FAM167BQ9BTA0 163 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 WWP1Q9H0M0 922 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 ADGRG1Q9Y653 693 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 SFI1A8K8P3 1242 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 IL13P35225 146 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.19□□□□□ -0.464e-12■■■□□ 15.8
SPTBN1-202ENST00000356805 WDR11Q9BZH6 1224 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 CEP72Q9P209 647 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 LRRIQ3A6PVS8 624 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 UBE2SQ16763 222 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 RCSD1Q6JBY9 416 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 LRRC8EQ6NSJ5 796 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 ALKBH5Q6P6C2 394 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 FOXP3Q9BZS1 431 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 UBXN8O00124 270 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 DFFAO00273 331 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 NBNO60934 754 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 KCNA3P22001 575 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 ARFIP2P53365 341 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 PMS2P54278 862 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 GYS2P54840 703 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 RESP18Q5W5W9 173 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 LRRC31Q6UY01 552 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 CCNYL1Q8N7R7 359 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SEC24DO94855 1032 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 GSNP06396 782 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 TTC23LQ6PF05 361 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 ATXN7L3BQ96GX2 97 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 CDHR1Q96JP9 859 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SSTR3P32745 418 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 MXI1P50539 228 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 DDX42Q86XP3 938 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SCG3Q8WXD2 468 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 PFASO15067 1338 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 RAD17O75943 681 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 IFNAR1P17181 557 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 TSPY1Q01534 308 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SURF1Q15526 300 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SLC10A5Q5PT55 438 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 RBM41Q96IZ5 413 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 DNAJC7Q99615 494 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 KIF2CQ99661 725 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SPDYE7PQ495Y7 208 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 SPATA21Q7Z572 469 aa12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 DDX53Q86TM3 631 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-202ENST00000356805 IQCA1LA6NCM1 817 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 EIF4E1BA6NMX2 242 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 MMP1P03956 469 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ADORA1P30542 326 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 PEX3P56589 373 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 TWF2Q6IBS0 349 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 DIABLOQ9NR28 239 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 EIF3DO15371 548 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 CTTNQ14247 550 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ANKS3Q6ZW76 656 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ZNF473Q8WTR7 871 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 USP44Q9H0E7 712 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 TMEM161AQ9NX61 479 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 YEATS2Q9ULM3 1422 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 PLA2G4BP0C869 781 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 HIC1Q14526 733 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 TOGARAM2Q6ZUX3 1019 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ZFP42Q96MM3 310 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 CYP4F11Q9HBI6 524 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ENO4A6NNW6 628 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 TBL3Q12788 808 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 LVRNQ6Q4G3 990 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 PKD2L2Q9NZM6 624 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 TTC7AQ9ULT0 858 aaPredicted RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 STRNO43815 780 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 BMP3P12645 472 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ORC2Q13416 577 aaPredicted RBP12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 SPDYAQ5MJ70 313 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 APOA5Q6Q788 366 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 DDI1Q8WTU0 396 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 BTBD6Q96KE9 485 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 MAGEB5Q9BZ81 275 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ADNPQ9H2P0 1102 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 MLXIPLQ9NP71 852 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 DCTN4Q9UJW0 460 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 LRRC74AQ0VAA2 488 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 A0A087WWV3 80 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 SUPT3HB4E1H0 165 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms