RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
TRIM13-201ENST00000356017 PRPF4BQ13523 1007 aaKnown RBP17.1■□□□□ 0.33
TRIM13-201ENST00000356017 TMEM240Q5SV17 173 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 ZNF365Q70YC5 407 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 C16orf59Q7L2K0 433 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 GTPBP4Q9BZE4 634 aaKnown RBP17.1■□□□□ 0.33
TRIM13-201ENST00000356017 UBE2OQ9C0C9 1292 aaKnown RBP17.1■□□□□ 0.33
TRIM13-201ENST00000356017 TBC1D7Q9P0N9 293 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 TBX20Q9UMR3 447 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 PIN4Q9Y237 131 aaKnown RBP17.1■□□□□ 0.33
TRIM13-201ENST00000356017 TSPAN1O60635 241 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 RHOBTB3O94955 611 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 GCNT3O95395 438 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 EPHB4P54760 987 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 AMHR2Q16671 573 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
TRIM13-201ENST00000356017 NUP62CLQ9H1M0 184 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 CLSTN2Q9H4D0 955 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 CNTNAP2Q9UHC6 1331 aa17.09■□□□□ 0.33
TRIM13-201ENST00000356017 BMP8BP34820 402 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 CAMK4Q16566 473 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 TMEM132AQ24JP5 1023 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 NT5DC1Q5TFE4 455 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 ADAM2Q99965 735 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.08■□□□□ 0.328e-10■■■□□ 19.2
TRIM13-201ENST00000356017 STRA6Q9BX79 667 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 TSPYL2Q9H2G4 693 aaPredicted RBP17.08■□□□□ 0.32
TRIM13-201ENST00000356017 TMX1Q9H3N1 280 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 C1orf112Q9NSG2 853 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
TRIM13-201ENST00000356017 EXOC7Q9UPT5 735 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 SIP14410 1827 aa17.08■□□□□ 0.32
TRIM13-201ENST00000356017 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 PPP1R37O75864 691 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 KIF20AO95235 890 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 SARSP49591 514 aaKnown RBP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 ZC2HC1CQ53FD0 456 aaPredicted RBP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 TAS1R3Q7RTX0 852 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 APBB1IPQ7Z5R6 666 aaPredicted RBP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 HERVK_113Q902F9 699 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 TRAIPQ9BWF2 469 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 TMEM206Q9H813 350 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 SLC39A2Q9NP94 309 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 RGS18Q9NS28 235 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 ENPP3O14638 875 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 B4GALT5O43286 388 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 SKIP12755 728 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 KCNJ6P48051 423 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 DSC3Q14574 896 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
TRIM13-201ENST00000356017 ZPBP2Q6X784 338 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 SLC24A5Q71RS6 500 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 MAP4K3Q8IVH8 894 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 ACCSQ96QU6 501 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 ADPGKQ9BRR6 497 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 KIAA1468Q9P260 1216 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 TNFSF13BQ9Y275 285 aa17.07■□□□□ 0.32
TRIM13-201ENST00000356017 MYH11P35749 1972 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 N4BP3O15049 544 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 MYBP10242 640 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 RAB27AP51159 221 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 CASP5P51878 434 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 STK4Q13043 487 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 TCTN1Q2MV58 587 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 ATF7IP2Q5U623 682 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 BICD1Q96G01 975 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 ACO2Q99798 780 aaKnown RBP17.06■□□□□ 0.32
TRIM13-201ENST00000356017 UBE4BO95155 1302 aa17.06■□□□□ 0.32
TRIM13-201ENST00000356017 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 HNRNPDLO14979 420 aaKnown RBP17.05■□□□□ 0.32
TRIM13-201ENST00000356017 MGEA5O60502 916 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 TOM1L1O75674 476 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 PIGRP01833 764 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 AMHP03971 560 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 LIG4P49917 911 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 SKOR2Q2VWA4 1001 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-201ENST00000356017 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-201ENST00000356017 RTN4RL1Q86UN2 441 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-201ENST00000356017 SYCP3Q8IZU3 236 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 ZNF507Q8TCN5 953 aa17.05■□□□□ 0.32
TRIM13-201ENST00000356017 ERCC4Q92889 916 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-201ENST00000356017 SYAP1Q96A49 352 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-201ENST00000356017 TARS2Q9BW92 718 aaKnown RBP17.05■□□□□ 0.32
TRIM13-201ENST00000356017 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms