RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ZCWPW2Q504Y3 356 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 B3GNT6Q6ZMB0 384 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 MFSD6Q6ZSS7 791 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 TMTC3Q6ZXV5 915 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 COPS6Q7L5N1 327 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 DAAM2Q86T65 1068 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 ART4Q93070 314 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 STRBPQ96SI9 672 aaKnown RBP8.25□□□□□ -1.09
CCR9-201ENST00000355983 BTBD10Q9BSF8 475 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 SEMA4AQ9H3S1 761 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 ETNK2Q9NVF9 386 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 NKIRAS1Q9NYS0 192 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 PLK2Q9NYY3 685 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 PCDHA3Q9Y5H8 950 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 TMEM110-MUSTN1A8MSY1 372 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 ZPR1O75312 459 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 TARSP26639 723 aaKnown RBP8.25□□□□□ -1.09
CCR9-201ENST00000355983 CALML3P27482 149 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 ZAP70P43403 619 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 KLHL30Q0D2K2 578 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 NR1H3Q13133 447 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 DCTN2Q13561 401 aaKnown RBP8.25□□□□□ -1.09
CCR9-201ENST00000355983 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
CCR9-201ENST00000355983 SEC23AQ15436 765 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 SYDE2Q5VT97 1194 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 BORAQ6PGQ7 559 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 LRRC55Q6ZSA7 311 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 SEPT14Q6ZU15 432 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 TMEM110Q86TL2 294 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 NUP93Q8N1F7 819 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 PLBD2Q8NHP8 589 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 FBXO25Q8TCJ0 367 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 CEP63Q96MT8 703 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 TRIM51Q9BSJ1 452 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 C17orf75Q9HAS0 396 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 GPAMQ9HCL2 828 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 CYLDQ9NQC7 956 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 EMILIN3Q9NT22 766 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 RHBDL2Q9NX52 303 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 AMFRQ9UKV5 643 aa8.25□□□□□ -1.09
CCR9-201ENST00000355983 ARAP2Q8WZ64 1704 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 TCRBV5S4A2TA0A5A2 114 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 KANSL1LA0AUZ9 987 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 PHF2O75151 1096 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 TBX10O75333 385 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 HNRNPCP07910 306 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCR9-201ENST00000355983 GNAT2P19087 354 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
CCR9-201ENST00000355983 MLH1P40692 756 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 PLCB3Q01970 1234 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 STK4Q13043 487 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 BCL2A1Q16548 175 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 PDCD4Q53EL6 469 aaKnown RBP8.24□□□□□ -1.09
CCR9-201ENST00000355983 HSP90AA5PQ58FG0 334 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 ACSBG2Q5FVE4 666 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 C1orf141Q5JVX7 400 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 DTHD1Q6ZMT9 781 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 PHLDB2Q86SQ0 1253 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 C10orf82Q8WW14 230 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 STMN2Q93045 179 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 FAM81BQ96LP2 452 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 ECSITQ9BQ95 431 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 CELF4Q9BZC1 486 aaKnown RBP8.24□□□□□ -1.09
CCR9-201ENST00000355983 SH3GLB2Q9NR46 395 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 BTBD7Q9P203 1132 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 ZNHIT2Q9UHR6 403 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 CHMP2BQ9UQN3 213 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 RGPD2P0DJD1 1756 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 PLCH1Q4KWH8 1693 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 TMEM247A6NEH6 219 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 H0Y3Z8 333 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 DDX3YO15523 660 aaKnown RBP8.24□□□□□ -1.09
CCR9-201ENST00000355983 MAGEC1O60732 1142 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 CSDE1O75534 798 aaKnown RBP8.24□□□□□ -1.09
CCR9-201ENST00000355983 UBA7P41226 1012 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 TXKP42681 527 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 EMP3P54852 163 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 PLTPP55058 493 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 SESN3P58005 492 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 ARHGAP4P98171 946 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 KRT72Q14CN4 511 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 CYP1B1Q16678 543 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 CTC1Q2NKJ3 1217 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 ZC2HC1CQ53FD0 456 aaPredicted RBP8.24□□□□□ -1.09
CCR9-201ENST00000355983 SCUBE1Q8IWY4 988 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 ZBED8Q8IZ13 594 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 ANKRD35Q8N283 1001 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 AGBL1Q96MI9 1066 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 TSG101Q99816 390 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 CADM1Q9BY67 442 aaKnown RBP8.24□□□□□ -1.09
CCR9-201ENST00000355983 NT5C3AQ9H0P0 336 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 NRDE2Q9H7Z3 1164 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 TCP11L1Q9NUJ3 509 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 TMOD4Q9NZQ9 345 aa8.24□□□□□ -1.09
CCR9-201ENST00000355983 FLT1P17948 1338 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 GSC2O15499 205 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 EDF1O60869 148 aaKnown RBP8.23□□□□□ -1.09
CCR9-201ENST00000355983 DNAJC6O75061 913 aa8.23□□□□□ -1.09
CCR9-201ENST00000355983 DDAH1O94760 285 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms