RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 MXI1P50539 228 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 HADHBP55084 474 aaKnown RBP23.57■■□□□ 1.36
LIMS2-202ENST00000355119 BAATQ14032 418 aaPredicted RBP23.57■■□□□ 1.36
LIMS2-202ENST00000355119 TCEAL1Q15170 157 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 PLA2G4FQ68DD2 849 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 RHOT2Q8IXI1 618 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 ATG4CQ96DT6 458 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 AP1M1Q9BXS5 423 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 PLEKHA4Q9H4M7 779 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 TBX20Q9UMR3 447 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 DOCK1Q14185 1865 aa23.57■■□□□ 1.36
LIMS2-202ENST00000355119 MAFGO15525 162 aa23.56■■□□□ 1.36
LIMS2-202ENST00000355119 DKC1O60832 514 aaKnown RBP eCLIP23.56■■□□□ 1.36
LIMS2-202ENST00000355119 OTUD6AQ7L8S5 288 aa23.56■■□□□ 1.36
LIMS2-202ENST00000355119 IQCKQ8N0W5 287 aa23.56■■□□□ 1.36
LIMS2-202ENST00000355119 ARHGEF26Q96DR7 871 aa23.56■■□□□ 1.36
LIMS2-202ENST00000355119 SH2D3AQ9BRG2 576 aa23.56■■□□□ 1.36
LIMS2-202ENST00000355119 THAP2Q9H0W7 228 aa23.56■■□□□ 1.36
LIMS2-202ENST00000355119 PFASO15067 1338 aa23.56■■□□□ 1.36
LIMS2-202ENST00000355119 DDX3YO15523 660 aaKnown RBP23.55■■□□□ 1.36
LIMS2-202ENST00000355119 SART1O43290 800 aaKnown RBP23.55■■□□□ 1.36
LIMS2-202ENST00000355119 SHOX2O60902 331 aaPredicted RBP23.55■■□□□ 1.36
LIMS2-202ENST00000355119 GUCY2FP51841 1108 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 ERVK-9P63128 1117 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 DMP1Q13316 513 aaPredicted RBP23.55■■□□□ 1.36
LIMS2-202ENST00000355119 CLUL1Q15846 466 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 VSIG10LQ86VR7 867 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 SCYL3Q8IZE3 742 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 CCDC26Q8TAB7 109 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 PLEKHO2Q8TD55 490 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 TMEM117Q9H0C3 514 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 TAS2R14Q9NYV8 317 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 HACL1Q9UJ83 578 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 PCDHA10Q9Y5I2 948 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 CCDC169A6NNP5 214 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 HSPA9P38646 679 aaKnown RBP23.55■■□□□ 1.36
LIMS2-202ENST00000355119 OAZ1P54368 228 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 BACE1P56817 501 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 POTEAQ6S8J7 498 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 LRRC31Q6UY01 552 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 MAP4K3Q8IVH8 894 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 CD302Q8IX05 232 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 TMEM161BQ8NDZ6 487 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 SLC20A1Q8WUM9 679 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 SPIRE2Q8WWL2 714 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 KIFAP3Q92845 792 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 C17orf75Q9HAS0 396 aa23.55■■□□□ 1.36
LIMS2-202ENST00000355119 PARP14Q460N5 1801 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 ADRB2P07550 413 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 NPTX2P47972 431 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 MAATS1Q7Z4T9 603 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 MICALL2Q8IY33 904 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 NAP1L3Q99457 506 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 NR3C2P08235 984 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 GMPSP49915 693 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 HLTFQ14527 1009 aaKnown RBP eCLIP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 SNRNP35Q16560 246 aaKnown RBP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 NBPF12Q5TAG4 269 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 PALB2Q86YC2 1186 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 RPUSD2Q8IZ73 545 aaKnown RBP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 ZSWIM2Q8NEG5 633 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 CARD9Q9H257 536 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 KMT5AQ9NQR1 393 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 RGS17Q9UGC6 210 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-202ENST00000355119 ZNF112Q9UJU3 913 aa23.54■■□□□ 1.36
LIMS2-202ENST00000355119 GOLGA8IPA6NC78 632 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 GOLGA8JA6NMD2 632 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 PPP2R5EQ16537 467 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 C11orf63Q6NUN7 778 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 ANO5Q75V66 913 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 ZNF280CQ8ND82 737 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 REPS2Q8NFH8 660 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 ATP6V0A1Q93050 837 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 DDX47Q9H0S4 455 aaKnown RBP23.53■■□□□ 1.36
LIMS2-202ENST00000355119 PICK1Q9NRD5 415 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 RIPK3Q9Y572 518 aa23.53■■□□□ 1.36
LIMS2-202ENST00000355119 ANKRD63C9JTQ0 380 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 NFKBIEO00221 500 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 RTN2O75298 545 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 FTLP02792 175 aaPredicted RBP23.52■■□□□ 1.36
LIMS2-202ENST00000355119 MFAP3P55082 362 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 TRADDQ15628 312 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 TTMPQ5BVD1 217 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 SAMD7Q7Z3H4 446 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 FAM71AQ8IYT1 594 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 TMC2Q8TDI7 906 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 ARL8AQ96BM9 186 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 C12orf42Q96LP6 360 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 DENND3A2RUS2 1198 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 ITGA4P13612 1032 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 GPC5P78333 572 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 TBC1D10BQ4KMP7 808 aaPredicted RBP23.52■■□□□ 1.36
LIMS2-202ENST00000355119 KRT39Q6A163 491 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 CBWD2Q8IUF1 395 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 NSUN6Q8TEA1 469 aaKnown RBP23.52■■□□□ 1.36
LIMS2-202ENST00000355119 PIK3R5Q8WYR1 880 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 WNK4Q96J92 1243 aa23.52■■□□□ 1.36
LIMS2-202ENST00000355119 NTPCRQ9BSD7 190 aaKnown RBP23.52■■□□□ 1.36
LIMS2-202ENST00000355119 GABBR1Q9UBS5 961 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms