RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PLA2G4FQ68DD2 849 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 STYK1Q6J9G0 422 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 PLEKHO2Q8TD55 490 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 CNKSR1Q969H4 720 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 ZNF341Q9BYN7 854 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 HSPBP1Q9NZL4 362 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 GOLGA6L10A0A0M3HER8 536 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 MYCBPAPQ8TBZ2 947 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 FAM151AQ8WW52 585 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 ZNF277Q9NRM2 450 aaPredicted RBP21.13■□□□□ 0.97
COL13A1-201ENST00000354547 CCDC169A6NNP5 214 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 CYP26A1O43174 497 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 NFIL3Q16649 462 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 FAM102BQ5T8I3 360 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 FBXW10Q5XX13 1052 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 NSMFQ6X4W1 530 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 HAUS6Q7Z4H7 955 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 OTUD6BQ8N6M0 293 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 RAVER2Q9HCJ3 691 aaKnown RBP21.12■□□□□ 0.97
COL13A1-201ENST00000354547 CNOT8Q9UFF9 292 aaKnown RBP21.12■□□□□ 0.97
COL13A1-201ENST00000354547 P4HBP07237 508 aaKnown RBP21.12■□□□□ 0.97
COL13A1-201ENST00000354547 LRIG3Q6UXM1 1119 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 FAM114A2Q9NRY5 505 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 PTPN22Q9Y2R2 807 aa21.12■□□□□ 0.97
COL13A1-201ENST00000354547 KIF22Q14807 665 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 INTS8Q75QN2 995 aaKnown RBP21.11■□□□□ 0.97
COL13A1-201ENST00000354547 B4GALNT4Q76KP1 1039 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 LARGE2Q8N3Y3 721 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 ACCSQ96QU6 501 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 PCDHB18PQ96TA0 734 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 TCEAL9Q9UHQ7 104 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 RARRES1P49788 294 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 SOX10P56693 466 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 PTENP60484 403 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 POU5F1Q01860 360 aaKnown RBP21.11■□□□□ 0.97
COL13A1-201ENST00000354547 IFT88Q13099 833 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 SPP2Q13103 211 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 TNIP1Q15025 636 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 UGCGQ16739 394 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 RUFY4Q6ZNE9 571 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 PHLDB2Q86SQ0 1253 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 SLC47A2Q86VL8 602 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 CBWD2Q8IUF1 395 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 XXYLT1Q8NBI6 393 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 MDM1Q8TC05 714 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 ATP8B4Q8TF62 1192 aa21.11■□□□□ 0.97
COL13A1-201ENST00000354547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.11■□□□□ 0.97
COL13A1-201ENST00000354547 KIF13BQ9NQT8 1826 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 A6NNZ2 444 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 SORBS3O60504 671 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 SHBGP04278 402 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 COMTP21964 271 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 CAP2P40123 477 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 TUBB8Q3ZCM7 444 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 RSBN1LQ6PCB5 846 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-201ENST00000354547 KCTD17Q8N5Z5 321 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 RIT2Q99578 217 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 CARD9Q9H257 536 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 KCND2Q9NZV8 630 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 UBE4BO95155 1302 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 MXI1P50539 228 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 MTMR3Q13615 1198 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 C7orf43Q8WVR3 580 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 KAT2BQ92831 832 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 ERP44Q9BS26 406 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 RAB17Q9H0T7 212 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 CAPN7Q9Y6W3 813 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 TCRBV7S2A1N4TA0A589 114 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 YWHABP31946 246 aaKnown RBP21.1■□□□□ 0.97
COL13A1-201ENST00000354547 SP4Q02446 784 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 MTMR1Q13613 665 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 TKFCQ3LXA3 575 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 C1orf220Q5T0J3 134 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 UBAP2Q5T6F2 1119 aaKnown RBP21.1■□□□□ 0.97
COL13A1-201ENST00000354547 B3GNT9Q6UX72 402 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 NOP9Q86U38 636 aaKnown RBP21.1■□□□□ 0.97
COL13A1-201ENST00000354547 JAMLQ86YT9 394 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 FBXO25Q8TCJ0 367 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 STRA6Q9BX79 667 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 TMEM117Q9H0C3 514 aa21.1■□□□□ 0.97
COL13A1-201ENST00000354547 TOPORSQ9NS56 1045 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-201ENST00000354547 CNTNAP1P78357 1384 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 H0YHG0 523 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 DHX15O43143 795 aaKnown RBP21.09■□□□□ 0.97
COL13A1-201ENST00000354547 ADRB2P07550 413 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 MMEP08473 750 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 GPC5P78333 572 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 FAM160B2Q86V87 743 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 ARFGAP2Q8N6H7 521 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 TMEM206Q9H813 350 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 FEM1BQ9UK73 627 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 QARSP47897 775 aaKnown RBP21.09■□□□□ 0.97
COL13A1-201ENST00000354547 KCNJ1P48048 391 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 MRPS9P82933 396 aaKnown RBP21.09■□□□□ 0.97
COL13A1-201ENST00000354547 XKR9Q5GH70 373 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 TAAR1Q96RJ0 339 aa21.09■□□□□ 0.97
COL13A1-201ENST00000354547 ATP9AO75110 1047 aa21.08■□□□□ 0.97
COL13A1-201ENST00000354547 PLS3P13797 630 aa21.08■□□□□ 0.97
COL13A1-201ENST00000354547 VCAM1P19320 739 aa21.08■□□□□ 0.97
COL13A1-201ENST00000354547 CHADLQ6NUI6 762 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms