RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 MRPL9Q9BYD2 267 aaKnown RBP12.8□□□□□ -0.36
CDRT1-202ENST00000354433 DHX33Q9H6R0 707 aaKnown RBP12.8□□□□□ -0.36
CDRT1-202ENST00000354433 ENTPD7Q9NQZ7 604 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 CHST12Q9NRB3 414 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 BRWD1Q9NSI6 2320 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 PCDHGC5Q9Y5F6 944 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 LINC01565O15544 149 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 GAS2O43903 313 aaKnown RBP12.79□□□□□ -0.36
CDRT1-202ENST00000354433 CUTAO60888 179 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 NR1I2O75469 434 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 CA8P35219 290 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 PPM1AP35813 382 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 NRIP1P48552 1158 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 CLLU1OSQ5K130 101 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
CDRT1-202ENST00000354433 PLPP4Q5VZY2 271 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 PRPF31Q8WWY3 499 aaKnown RBP12.79□□□□□ -0.36
CDRT1-202ENST00000354433 ZNF558Q96NG5 402 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 CWH43Q9H720 699 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
CDRT1-202ENST00000354433 INPP5FQ9Y2H2 1132 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 KIAA1671Q9BY89 1806 aa12.79□□□□□ -0.36
CDRT1-202ENST00000354433 WDR81Q562E7 1941 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 GRXCR2A6NFK2 248 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 ZBTB39O15060 712 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 KINO60870 393 aaKnown RBP12.78□□□□□ -0.36
CDRT1-202ENST00000354433 TBX10O75333 385 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 ERLIN2O94905 339 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 SLITRK3O94933 977 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 EOMESO95936 686 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 SKIP12755 728 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 PHKA2P46019 1235 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 RAB27AP51159 221 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
CDRT1-202ENST00000354433 LAMTOR4Q0VGL1 99 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
CDRT1-202ENST00000354433 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 GJD3Q8N144 294 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 LPPQ93052 612 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 TCF25Q9BQ70 676 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 FAM105AQ9NUU6 356 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 RNF19AQ9NV58 838 aa12.78□□□□□ -0.36
CDRT1-202ENST00000354433 PER2O15055 1255 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.36
CDRT1-202ENST00000354433 DGAT1O75907 488 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.36
CDRT1-202ENST00000354433 KRT17Q04695 432 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 RNASELQ05823 741 aaKnown RBP12.77□□□□□ -0.36
CDRT1-202ENST00000354433 COL19A1Q14993 1142 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 TPRNQ4KMQ1 711 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 GLB1LQ6UWU2 654 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 LRRC55Q6ZSA7 311 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 FAM178BQ8IXR5 827 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 FMR1NBQ8N0W7 255 aaPredicted RBP12.77□□□□□ -0.36
CDRT1-202ENST00000354433 PIGOQ8TEQ8 1089 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 TIGD1Q96MW7 591 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 RBSNQ9H1K0 784 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 TMEM60Q9H2L4 133 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 GOLPH3LQ9H4A5 285 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 TLE6Q9H808 572 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.36
CDRT1-202ENST00000354433 USO1O60763 962 aaKnown RBP12.77□□□□□ -0.37
CDRT1-202ENST00000354433 OR52Z1P0C646 297 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 CCDC192P0DO97 292 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 LTBRP36941 435 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
CDRT1-202ENST00000354433 ERVFC1P60507 584 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 TFDP1Q14186 410 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 ZNF174Q15697 407 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 CTC1Q2NKJ3 1217 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 UVSSAQ2YD98 709 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 ZNF598Q86UK7 904 aaKnown RBP12.77□□□□□ -0.37
CDRT1-202ENST00000354433 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
CDRT1-202ENST00000354433 ERMNQ8TAM6 284 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 PGBD4Q96DM1 585 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 MTMR9Q96QG7 549 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 HSD17B14Q9BPX1 270 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 C1QTNF1Q9BXJ1 281 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 GBP3Q9H0R5 595 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 CD207Q9UJ71 328 aa12.77□□□□□ -0.37
CDRT1-202ENST00000354433 BARX2Q9UMQ3 279 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-202ENST00000354433 FNDC1Q4ZHG4 1894 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-202ENST00000354433 MYO7AQ13402 2215 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 NCOR1O75376 2440 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 INO80B-WBP1J3KQ70 363 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 ASAP2O43150 1006 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 CAVIN2O95810 425 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 SRGAP2BP0DMP2 458 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 TECP42680 631 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 RARRES1P49788 294 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 PLCB3Q01970 1234 aa12.76□□□□□ -0.37
CDRT1-202ENST00000354433 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
CDRT1-202ENST00000354433 SMAD4Q13485 552 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms