RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FAM205AQ6ZU69 1335 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 LMO7Q8WWI1 1683 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 GRIA2P42262 883 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 STRN3Q13033 797 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 MOGSQ13724 837 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 DHX34Q14147 1143 aaKnown RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 TXNRD1Q16881 649 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 C10orf76Q5T2E6 689 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 DAB2IPQ5VWQ8 1189 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 AADACL2Q6P093 401 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 SATL1Q86VE3 508 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 GLIS3Q8NEA6 775 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 SH3RF3Q8TEJ3 882 aaPredicted RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 SERPINB12Q96P63 405 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 CCDC28BQ9BUN5 200 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 SYNCQ9H7C4 482 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 INIPQ9NRY2 104 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 NLRP2Q9NX02 1062 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 PPP1R9AQ9ULJ8 1098 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 STARD13Q9Y3M8 1113 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 ANKRD63C9JTQ0 380 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 ALOX15P16050 662 aaPredicted RBP14.18□□□□□ -0.14
IFT88-202ENST00000351808 PTGIRP43119 386 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 PPP2R5BQ15173 497 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 SLC44A4Q53GD3 710 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 KLC3Q6P597 504 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 DYMQ7RTS9 669 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 IRF2BP2Q7Z5L9 587 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 NME8Q8N427 588 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 SPIRE2Q8WWL2 714 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 BRD8Q9H0E9 1235 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 CDC42EP4Q9H3Q1 356 aaKnown RBP14.18□□□□□ -0.14
IFT88-202ENST00000351808 ZNF212Q9UDV6 495 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 ZFP69BQ9UJL9 534 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 TTC7AQ9ULT0 858 aaPredicted RBP14.18□□□□□ -0.14
IFT88-202ENST00000351808 ATRNO75882 1429 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 EXOC3O60645 756 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 WDR4P57081 412 aaKnown RBP14.18□□□□□ -0.14
IFT88-202ENST00000351808 PHEXP78562 749 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 RRP1BQ14684 758 aaKnown RBP14.18□□□□□ -0.14
IFT88-202ENST00000351808 SYCE1Q8N0S2 351 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 SRBD1Q8N5C6 995 aaKnown RBP14.18□□□□□ -0.14
IFT88-202ENST00000351808 ENAHQ8N8S7 591 aaPredicted RBP14.18□□□□□ -0.14
IFT88-202ENST00000351808 CFAP61Q8NHU2 1237 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 OSGEPQ9NPF4 335 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 SUN2Q9UH99 717 aa14.18□□□□□ -0.14
IFT88-202ENST00000351808 RTL9Q8NET4 1388 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 GSC2O15499 205 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 H2AFZP0C0S5 128 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 ACTN1P12814 892 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 ATP5DP30049 168 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 TBC1D9BQ66K14 1250 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 H2AFVQ71UI9 128 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 CATIPQ7Z7H3 387 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 SCYL3Q8IZE3 742 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 MAGEB6Q8N7X4 407 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 PDCD7Q8N8D1 485 aaKnown RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 RUNDC3BQ96NL0 473 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 DDX18Q9NVP1 670 aaKnown RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 NUMBLQ9Y6R0 609 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 FLT1P17948 1338 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 UMODL1Q5DID0 1318 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 NFAT5O94916 1531 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 TRIM43BA6NCK2 446 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 MINDY4BA8MYZ0 360 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 BOLA2-SMG1P6H3BVE0 249 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 DDX3YO15523 660 aaKnown RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 IL9RQ01113 521 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 THOC5Q13769 683 aaKnown RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 PPP2R5EQ16537 467 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 CCDC92Q53HC0 331 aaPredicted RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 MTDHQ86UE4 582 aaKnown RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 SLF2Q8IX21 1173 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 ARHGEF1Q92888 912 aaKnown RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 SIKE1Q9BRV8 207 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 IL1RAPL1Q9NZN1 696 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 TDRKHQ9Y2W6 561 aaKnown RBP14.17□□□□□ -0.14
IFT88-202ENST00000351808 LMTK3Q96Q04 1460 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 PKD1L3Q7Z443 1732 aa14.17□□□□□ -0.14
IFT88-202ENST00000351808 TRAF5O00463 557 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 SCG2P13521 617 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 OXCT1P55809 520 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 PALB2Q86YC2 1186 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 CDK5RAP3Q96JB5 506 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 FNBP1Q96RU3 617 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 UNC45AQ9H3U1 944 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 DNAJC17Q9NVM6 304 aaKnown RBP14.16□□□□□ -0.14
IFT88-202ENST00000351808 COL4A3BPQ9Y5P4 624 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 CNTNAP5Q8WYK1 1306 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 ASMTLO95671 621 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 MLH1P40692 756 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 EPS15P42566 896 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 AMPD3Q01432 767 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 DSG1Q02413 1049 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 LRRC63Q05C16 580 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 SLC4A8Q2Y0W8 1093 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 COBLL1Q53SF7 1204 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms