RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ESYT2A0FGR8 921 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 NTSR2O95665 410 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 LRRC14Q15048 493 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 EPS15L1Q9UBC2 864 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 ATP8B3O60423 1300 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 RASA1P20936 1047 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 TNFAIP2Q03169 654 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 TUFT1Q9NNX1 390 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 PNMA3Q9UL41 463 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 STRIP2Q9ULQ0 834 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 UBE2Q2LH0YL09 131 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 WDR46O15213 610 aaKnown RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 KIAA1841Q6NSI8 718 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 FBXL13Q8NEE6 735 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 TUBB6Q9BUF5 446 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 KLHL8Q9P2G9 620 aaPredicted RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 AGO2Q9UKV8 859 aaKnown RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 GMNCA6NCL1 334 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 TFDP2Q14188 446 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 PRR5LQ6MZQ0 368 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 IP6K2Q9UHH9 426 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 NDUFB10O96000 172 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 EXT2Q93063 718 aa17.07■□□□□ 0.32
PTPN11-201ENST00000351677 CALR3Q96L12 384 aaKnown RBP17.07■□□□□ 0.32
PTPN11-201ENST00000351677 ITIH6Q6UXX5 1313 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 MYBP10242 640 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 PDHBP11177 359 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 CRLF3Q8IUI8 442 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 CACYBPQ9HB71 228 aaKnown RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 USH1CQ9Y6N9 552 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 ANXA13P27216 316 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 ART3Q13508 389 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 ATP6V1G3Q96LB4 118 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 PCDHA10Q9Y5I2 948 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 KRT14P02533 472 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 KPNA2P52292 529 aaKnown RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 CAV1Q03135 178 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 C16orf86Q6ZW13 317 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 MYCBPQ99417 103 aaPredicted RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 MRPL4Q9BYD3 311 aaKnown RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 EDEM3Q9BZQ6 932 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 ACAD9Q9H845 621 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 MYCP01106 439 aaPredicted RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 HVCN1Q96D96 273 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 SLITRK6Q9H5Y7 841 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 PPARGC1AQ9UBK2 798 aaKnown RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.06■□□□□ 0.32
PTPN11-201ENST00000351677 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
PTPN11-201ENST00000351677 PI4K2BG5E9Z4 385 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 KITP10721 976 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 SMAD1Q15797 465 aaKnown RBP17.05■□□□□ 0.32
PTPN11-201ENST00000351677 SLC18A3Q16572 532 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 EP400NLQ6ZTU2 488 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 SMARCAL1Q9NZC9 954 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 BRAFP15056 766 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 TADA2BQ86TJ2 420 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 RHOT1Q8IXI2 618 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 SYT2Q8N9I0 419 aaPredicted RBP17.05■□□□□ 0.32
PTPN11-201ENST00000351677 GJD4Q96KN9 370 aaPredicted RBP17.05■□□□□ 0.32
PTPN11-201ENST00000351677 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 TARSL2A2RTX5 802 aaKnown RBP17.05■□□□□ 0.32
PTPN11-201ENST00000351677 FAM187AA6NFU0 413 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 CREB3O43889 395 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 RFX1P22670 979 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 ITPK1Q13572 414 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 HIPK4Q8NE63 616 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 HSPA4LO95757 839 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 GYPCP04921 128 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 FGFR4P22455 802 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 PDIA2Q13087 525 aaKnown RBP17.05■□□□□ 0.32
PTPN11-201ENST00000351677 ZBED8Q8IZ13 594 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 SLC30A5Q8TAD4 765 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 SPATA33Q96N06 139 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 TOPORSQ9NS56 1045 aaPredicted RBP17.05■□□□□ 0.32
PTPN11-201ENST00000351677 DCTN3O75935 186 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 XPAP23025 273 aaPredicted RBP17.05■□□□□ 0.32
PTPN11-201ENST00000351677 NLRP14Q86W24 1093 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 CYTH2Q99418 400 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 SLC9A2Q9UBY0 812 aa17.05■□□□□ 0.32
PTPN11-201ENST00000351677 CTIFO43310 598 aaKnown RBP17.04■□□□□ 0.32
PTPN11-201ENST00000351677 MAGEA9P43362 315 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 MTMR2Q13614 643 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 TWF2Q6IBS0 349 aaKnown RBP17.04■□□□□ 0.32
PTPN11-201ENST00000351677 FBXO41Q8TF61 875 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 SNF8Q96H20 258 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 HSPBP1Q9NZL4 362 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 CCDC195A0A1B0GUA6 201 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 SMIM24O75264 130 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms