RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 GBP6Q6ZN66 633 aa20.37■□□□□ 0.85
PTN-201ENST00000348225 RDH13Q8NBN7 331 aa20.37■□□□□ 0.85
PTN-201ENST00000348225 KLRC1P26715 233 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 FLT3LGP49771 235 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 EXOC3L4Q17RC7 722 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 SLFN12LQ6IEE8 588 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 SLC39A4Q6P5W5 647 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 CACNA2D4Q7Z3S7 1137 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 RHPN2Q8IUC4 686 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 RNF149Q8NC42 400 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 ZNF784Q8NCA9 323 aaPredicted RBP20.36■□□□□ 0.85
PTN-201ENST00000348225 KIAA1586Q9HCI6 787 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 AGPAT5Q9NUQ2 364 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 CEP72Q9P209 647 aa20.36■□□□□ 0.85
PTN-201ENST00000348225 N4BP1O75113 896 aaKnown RBP20.35■□□□□ 0.85
PTN-201ENST00000348225 TBC1D8O95759 1140 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 F2P00734 622 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 SRGAP2CP0DJJ0 459 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 MAP2K2P36507 400 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 VAMP7P51809 220 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 SNRNP35Q16560 246 aaKnown RBP20.35■□□□□ 0.85
PTN-201ENST00000348225 USP37Q86T82 979 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 CCAR2Q8N163 923 aaKnown RBP20.35■□□□□ 0.85
PTN-201ENST00000348225 GPD1LQ8N335 351 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 CRACR2AQ9BSW2 395 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 NUCKS1Q9H1E3 243 aaKnown RBP20.35■□□□□ 0.85
PTN-201ENST00000348225 PLCB1Q9NQ66 1216 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 GABRQQ9UN88 632 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 RRN3P2A6NIE6 340 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 FMO5P49326 533 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 CLCN3P51790 818 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 PRKCZQ05513 592 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 ENPEPQ07075 957 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 GRIK4Q16099 956 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 E4F1Q66K89 784 aaPredicted RBP20.35■□□□□ 0.85
PTN-201ENST00000348225 MTHFD1LQ6UB35 978 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 ZPBP2Q6X784 338 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 SAAL1Q96ER3 474 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 FBXL18Q96ME1 805 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 GCNT4Q9P109 453 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 STYXL1Q9Y6J8 313 aa20.35■□□□□ 0.85
PTN-201ENST00000348225 GOLGA8IPA6NC78 632 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 GOLGA8JA6NMD2 632 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 EPHB6O15197 1021 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 ZSCAN12O43309 604 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 TRIM49P0CI25 452 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 TRIM49CP0CI26 452 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 MYL7Q01449 175 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 MEA1Q16626 185 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 MAPK6Q16659 721 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 LINC01465Q8N7H1 131 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 TRIB2Q92519 343 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 LENG1Q96BZ8 264 aaPredicted RBP20.34■□□□□ 0.85
PTN-201ENST00000348225 NLRP4Q96MN2 994 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 MRPL4Q9BYD3 311 aaKnown RBP20.34■□□□□ 0.85
PTN-201ENST00000348225 CCDC113Q9H0I3 377 aa20.34■□□□□ 0.85
PTN-201ENST00000348225 SOWAHDA6NJG2 315 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 DUSP11O75319 330 aaKnown RBP20.33■□□□□ 0.84
PTN-201ENST00000348225 CYBAP13498 195 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 POU5F1BQ06416 359 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 CETN1Q12798 172 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 CBWD2Q8IUF1 395 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 KATNAL1Q9BW62 490 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 NFKBIZQ9BYH8 718 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 KAT6AQ92794 2004 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 EVPLQ92817 2033 aa20.33■□□□□ 0.84
PTN-201ENST00000348225 P4HA2O15460 535 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 EXTL3O43909 919 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 LDHAP00338 332 aaKnown RBP20.32■□□□□ 0.84
PTN-201ENST00000348225 PRKCBP05771 671 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 ADRB2P07550 413 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 PON1P27169 355 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 HOXD10P28358 340 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 MATR3P43243 847 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTN-201ENST00000348225 PHKA2P46019 1235 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 MCCD1P59942 119 aaPredicted RBP20.32■□□□□ 0.84
PTN-201ENST00000348225 BAP1Q92560 729 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 MAP7D2Q96T17 732 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 TARS2Q9BW92 718 aaKnown RBP20.32■□□□□ 0.84
PTN-201ENST00000348225 AGO2Q9UKV8 859 aaKnown RBP20.32■□□□□ 0.84
PTN-201ENST00000348225 AKT3Q9Y243 479 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 NRCAMQ92823 1304 aa20.32■□□□□ 0.84
PTN-201ENST00000348225 ZNF233A6NK53 670 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 MSCO60682 206 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 NOL4O94818 638 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 MYL3P08590 195 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 HNRNPH3P31942 346 aaKnown RBP20.31■□□□□ 0.84
PTN-201ENST00000348225 PTENP60484 403 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 POLR2FP61218 127 aaKnown RBP20.31■□□□□ 0.84
PTN-201ENST00000348225 CDK17Q00537 523 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 MFSD10Q14728 455 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 FSCN1Q16658 493 aaKnown RBP20.31■□□□□ 0.84
PTN-201ENST00000348225 KIAA0753Q2KHM9 967 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 PDXDC1Q6P996 788 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 RRAGAQ7L523 313 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 ZSWIM2Q8NEG5 633 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 TRPV1Q8NER1 839 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 TMC2Q8TDI7 906 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 MFSD14AQ96MC6 490 aa20.31■□□□□ 0.84
PTN-201ENST00000348225 FAM213AQ9BRX8 229 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms