RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PRKCBP05771 671 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 DARSP14868 501 aaKnown RBP20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 PPP1R2P41236 205 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 EFNA5P52803 228 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 CT47A1Q5JQC4 288 aaPredicted RBP20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 ANKRD33Q7Z3H0 272 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 NECAB2Q7Z6G3 386 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 FAM200AQ8TCP9 573 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 INO80BQ9C086 356 aaPredicted RBP20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 NAT10Q9H0A0 1025 aaKnown RBP20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 ALPK3Q96L96 1907 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 CLIC2O15247 247 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 CKBP12277 381 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 CRYBB1P53674 252 aaPredicted RBP20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 ZNF618Q5T7W0 954 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 C1orf53Q5VUE5 145 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 SRGAP1Q7Z6B7 1085 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 RSPH3Q86UC2 560 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 SYCP3Q8IZU3 236 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 ENOX1Q8TC92 643 aaKnown RBP20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 TARS2Q9BW92 718 aaKnown RBP20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 GCOM2Q9BZD3 368 aaPredicted RBP20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 HSD3B7Q9H2F3 369 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 TYW1Q9NV66 732 aaKnown RBP20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 KIF20AO95235 890 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 CAPN2P17655 700 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 CDC42EP1Q00587 391 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 FAAP100Q0VG06 881 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 MAPK6Q16659 721 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 FAM26DQ5JW98 314 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 EEF2KMTQ96G04 330 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 ZBTB45Q96K62 511 aaPredicted RBP20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 GBP3Q9H0R5 595 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 TMEM206Q9H813 350 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 AGPAT3Q9NRZ7 376 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 TRAF3IP3Q9Y228 551 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 ATP11BQ9Y2G3 1177 aa20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 NOC2LQ9Y3T9 749 aaKnown RBP20.85■□□□□ 0.93
CHMP4A-201ENST00000347519 ACKR2O00590 384 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 PDXKO00764 312 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 CAVIN2O95810 425 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 PIGRP01833 764 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 ADSSP30520 456 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 MYL5Q02045 173 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 STRN3Q13033 797 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 FAM187BQ17R55 369 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 SPATA1Q5VX52 437 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 ZSWIM2Q8NEG5 633 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 HAPLN2Q9GZV7 340 aa20.84■□□□□ 0.93
CHMP4A-201ENST00000347519 UMODL1Q5DID0 1318 aa20.83■□□□□ 0.93
CHMP4A-201ENST00000347519 MROH7Q68CQ1 1323 aa20.83■□□□□ 0.93
CHMP4A-201ENST00000347519 TLR3O15455 904 aaKnown RBP20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 TSPAN1O60635 241 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 SCP2P22307 547 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 RBL2Q08999 1139 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 MBTPS1Q14703 1052 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 EEF1DP3Q658K8 133 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 LRRC55Q6ZSA7 311 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 FAM228AQ86W67 206 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 CDR2LQ86X02 465 aaPredicted RBP20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 ZC3H3Q8IXZ2 948 aaKnown RBP20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 BICD1Q96G01 975 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 CPB2Q96IY4 423 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 TOX2Q96NM4 488 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 ACO2Q99798 780 aaKnown RBP20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 CBWD1Q9BRT8 395 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 SAMSN1Q9NSI8 373 aaKnown RBP20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 PRMT7Q9NVM4 692 aaPredicted RBP20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 FANCLQ9NW38 375 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 EXOC7Q9UPT5 735 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 NFE2L3Q9Y4A8 694 aa20.83■□□□□ 0.92
CHMP4A-201ENST00000347519 BICDL2A1A5D9 508 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 M0QZ92 97 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 IKBKBO14920 756 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 CALUO43852 315 aaPredicted RBP20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 RPLP2P05387 115 aaKnown RBP20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 LRRC63Q05C16 580 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 PRPF4BQ13523 1007 aaKnown RBP20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 HSP90AA4PQ58FG1 418 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 FBXO47Q5MNV8 452 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 TSG101Q99816 390 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 NOC4LQ9BVI4 516 aaKnown RBP20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 SRRTQ9BXP5 876 aaKnown RBP20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 MRPL4Q9BYD3 311 aaKnown RBP20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 PCIF1Q9H4Z3 704 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 AGO3Q9H9G7 860 aaKnown RBP20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 DMAC2Q9NW81 257 aa20.82■□□□□ 0.92
CHMP4A-201ENST00000347519 SCN5AQ14524 2016 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 DCDC2CA8MYV0 355 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 ABLIM1O14639 778 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 CAND2O75155 1236 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 NR3C1P04150 777 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 ARF4P18085 180 aaPredicted RBP20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 ABCD1P33897 745 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 LIG4P49917 911 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 FOXR2Q6PJQ5 311 aa20.81■□□□□ 0.92
CHMP4A-201ENST00000347519 CATSPER4Q7RTX7 472 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms