RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 RSAD1Q9HA92 442 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 SPG21Q9NZD8 308 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 CCDC39Q9UFE4 941 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 MTMR6Q9Y217 621 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 CCDC169A6NNP5 214 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 N4BP3O15049 544 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 FGF18O76093 207 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 ITGB1P05556 798 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 LINC00271P0C7V0 271 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 HOXA11P31270 313 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 SMTNP53814 917 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 RESTQ13127 1097 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 PRPF4BQ13523 1007 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 LONRF3Q496Y0 759 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 CLLU1OSQ5K130 101 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 CDCA2Q69YH5 1023 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 SPPL3Q8TCT6 385 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 LPPQ93052 612 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 CPB2Q96IY4 423 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 PLIN2Q99541 437 aa17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 MMTAG2Q9BU76 263 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-201ENST00000346501 FNDC1Q4ZHG4 1894 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 K7ERI5 159 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 NR1I2O75469 434 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 CSPG5O95196 566 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 PRKCBP05771 671 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 ARF4P18085 180 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 FAM187BQ17R55 369 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 TCEAL5Q5H9L2 206 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 RINT1Q6NUQ1 792 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 SYT2Q8N9I0 419 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 TMEM169Q96HH4 297 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 ASB2Q96Q27 587 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 CWH43Q9H720 699 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 TLR9Q9NR96 1032 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 RNF19AQ9NV58 838 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 LZTS1Q9Y250 596 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 COL6A3P12111 3177 aa17.4■□□□□ 0.38
TSPAN4-201ENST00000346501 A0A1B0GUA9 196 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 H0YCG3 227 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 ACKR2O00590 384 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 HIP1RO75146 1068 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 ZC3H11AO75152 810 aaKnown RBP eCLIP17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 OFD1O75665 1012 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 PLA2G4BP0C869 781 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 GUCY2CP25092 1073 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 PEX3P56589 373 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 PLCB3Q01970 1234 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 STK38Q15208 465 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 MRPS27Q92552 414 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 GBP3Q9H0R5 595 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 FZD8Q9H461 694 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 LARSQ9P2J5 1176 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 STK39Q9UEW8 545 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 GIT1Q9Y2X7 761 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 IPPQ9Y573 584 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 CLIC4Q9Y696 253 aa17.39■□□□□ 0.37
TSPAN4-201ENST00000346501 CHD9Q3L8U1 2897 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 DLL1O00548 723 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 NPTXRO95502 500 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 BCAR1P56945 870 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 AMHR2Q16671 573 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 UBXN11Q5T124 520 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 C1orf186Q6ZWK4 172 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 PNMA5Q96PV4 448 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 RPS6KC1Q96S38 1066 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 APOL6Q9BWW8 343 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 CCSER1Q9C0I3 900 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 UBE2ZQ9H832 354 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 ENTPD7Q9NQZ7 604 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 TBC1D13Q9NVG8 400 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 PARP2Q9UGN5 583 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 FAM50BQ9Y247 325 aa17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 SRPRBQ9Y5M8 271 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-201ENST00000346501 B4GALT5O43286 388 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 ALDH2P05091 517 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 SRGAP2BP0DMP2 458 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 STRN3Q13033 797 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 DHX8Q14562 1220 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 DCAF4L1Q3SXM0 396 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 TMEM119Q4V9L6 283 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 AGMOQ6ZNB7 445 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 TMC7Q7Z402 723 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 KCNK18Q7Z418 384 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms