RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 KIAA1024Q9UPX6 916 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 GH1P01241 217 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 PRKCIP41743 596 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 FOXR2Q6PJQ5 311 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 MTRF1LQ9UGC7 380 aaKnown RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 PTPN22Q9Y2R2 807 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 ARL2BPQ9Y2Y0 163 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 ROBO3Q96MS0 1386 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 A0A0A6YYK5 440 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 FAM187AA6NFU0 413 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 ECE2O60344 883 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 AKR1B1P15121 316 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 APOBEC3HQ6NTF7 200 aaKnown RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 ARHGEF2Q92974 986 aaKnown RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 SPZ1Q9BXG8 430 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 TTC7AQ9ULT0 858 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 PCDHA2Q9Y5H9 948 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 FRMPD2Q68DX3 1309 aaPredicted RBP23.02■■□□□ 1.28
TRIM3-201ENST00000345851 HIP1RO75146 1068 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 XRCC5P13010 732 aaKnown RBP23.02■■□□□ 1.28
TRIM3-201ENST00000345851 PLS1Q14651 629 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 ASRGL1Q7L266 308 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 STMN4Q9H169 189 aaPredicted RBP23.02■■□□□ 1.28
TRIM3-201ENST00000345851 GCNT4Q9P109 453 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 NENFQ9UMX5 172 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 DDX60LQ5H9U9 1706 aaKnown RBP23.02■■□□□ 1.28
TRIM3-201ENST00000345851 ACSL3O95573 720 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 ARHGEF26Q96DR7 871 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 DDX23Q9BUQ8 820 aaKnown RBP23.02■■□□□ 1.28
TRIM3-201ENST00000345851 RXFP1Q9HBX9 757 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 CTNNAL1Q9UBT7 734 aa23.02■■□□□ 1.28
TRIM3-201ENST00000345851 NRXN2Q9P2S2 1712 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 ANKRD63C9JTQ0 380 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 LIN7AO14910 233 aaPredicted RBP23.01■■□□□ 1.27
TRIM3-201ENST00000345851 DHX34Q14147 1143 aaKnown RBP23.01■■□□□ 1.27
TRIM3-201ENST00000345851 PDIA5Q14554 519 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 CPSF2Q9P2I0 782 aaKnown RBP23.01■■□□□ 1.27
TRIM3-201ENST00000345851 SCN9AQ15858 1988 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 RAD21O60216 631 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 SMIM24O75264 130 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 PECAM1P16284 738 aaPredicted RBP23.01■■□□□ 1.27
TRIM3-201ENST00000345851 PCK1P35558 622 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 CRKP46108 304 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 TUBP50607 506 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 RWDD2BP57060 319 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 SLC30A9Q6PML9 568 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 CTNNBL1Q8WYA6 563 aaPredicted RBP23.01■■□□□ 1.27
TRIM3-201ENST00000345851 NAP1L3Q99457 506 aaPredicted RBP23.01■■□□□ 1.27
TRIM3-201ENST00000345851 PLCD4Q9BRC7 762 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 CARD9Q9H257 536 aa23.01■■□□□ 1.27
TRIM3-201ENST00000345851 CNOT7Q9UIV1 285 aaKnown RBP23.01■■□□□ 1.27
TRIM3-201ENST00000345851 POTEB3A0JP26 581 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 SPDYE5A6NIY4 337 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 TMEM110-MUSTN1A8MSY1 372 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 POTECB2RU33 542 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 MAP3K13O43283 966 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 PLA2G4BP0C869 781 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 MGAT5Q09328 741 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 POTEBQ6S5H4 581 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 RFFLQ8WZ73 363 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 TEKT1Q969V4 418 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 USP17L5A8MUK1 530 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 NEFHP12036 1026 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 NPEPPSP55786 919 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 LLGL1Q15334 1064 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 UBE2SQ16763 222 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 ANO7Q6IWH7 933 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 TTC27Q6P3X3 843 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 UTP4Q969X6 686 aaKnown RBP23■■□□□ 1.27
TRIM3-201ENST00000345851 TSC22D3Q99576 134 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 SIX2Q9NPC8 291 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 TNS1Q9HBL0 1735 aaKnown RBP23■■□□□ 1.27
TRIM3-201ENST00000345851 PFASO15067 1338 aa23■■□□□ 1.27
TRIM3-201ENST00000345851 GNAT1P11488 350 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 PTGIRP43119 386 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 MARCKSL1P49006 195 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 RAD23BP54727 409 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 NEDD1Q8NHV4 660 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 LZTS2Q9BRK4 669 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 H0Y3Z8 333 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 GJB6O95452 261 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 CASP4P49662 377 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 EPHA7Q15375 998 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 VSTM1Q6UX27 236 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 SEPT14Q6ZU15 432 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 TMEM237Q96Q45 408 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 TGS1Q96RS0 853 aaKnown RBP22.99■■□□□ 1.27
TRIM3-201ENST00000345851 TRIM7Q9C029 511 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 DNAJC17Q9NVM6 304 aaKnown RBP22.99■■□□□ 1.27
TRIM3-201ENST00000345851 AKAP3O75969 853 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 MXRA7P84157 204 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 BTNL9Q6UXG8 535 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 PRELID2Q8N945 189 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 ANKLE1Q8NAG6 615 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 TAS2R14Q9NYV8 317 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 KLHL14Q9P2G3 628 aa22.99■■□□□ 1.27
TRIM3-201ENST00000345851 KCNJ1P48048 391 aa22.98■■□□□ 1.27
TRIM3-201ENST00000345851 PPATQ06203 517 aa22.98■■□□□ 1.27
TRIM3-201ENST00000345851 TNIP1Q15025 636 aa22.98■■□□□ 1.27
TRIM3-201ENST00000345851 PPP2R5EQ16537 467 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms