RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
ATG4A-202ENST00000345734 ALDH5A1P51649 535 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-202ENST00000345734 APBA1Q02410 837 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 STXBP2Q15833 593 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 MEA1Q16626 185 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 XKR9Q5GH70 373 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 MAP1SQ66K74 1059 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-202ENST00000345734 GPAT2Q6NUI2 795 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 SEPT14Q6ZU15 432 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 ANO5Q75V66 913 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 FRMD5Q7Z6J6 570 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 ANKLE1Q8NAG6 615 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 DNERQ8NFT8 737 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 CCDC43Q96MW1 224 aaKnown RBP10.11□□□□□ -0.79
ATG4A-202ENST00000345734 WDR24Q96S15 920 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 STRA6Q9BX79 667 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF408Q9H9D4 720 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF358Q9NW07 568 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 SLC9A2Q9UBY0 812 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 REXO2Q9Y3B8 237 aaKnown RBP10.11□□□□□ -0.79
ATG4A-202ENST00000345734 IQCA1LA6NCM1 817 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 GOLGA6L9A6NEM1 432 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 K7ENM7 598 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 EIF3JO75822 258 aaKnown RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 STAM2O75886 525 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 STBD1O95210 358 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 GTF2F1P35269 517 aaKnown RBP eCLIP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 ACTR2P61160 394 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 GNG11P61952 73 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 GNPTABQ3T906 1256 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 LDLRAD1Q5T700 205 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 SWSAP1Q6NVH7 229 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 CCDC60Q8IWA6 550 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 RDM1Q8NG50 284 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 NEK11Q8NG66 645 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 CDHR1Q96JP9 859 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 LSM14BQ9BX40 385 aaKnown RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 MAF1Q9H063 256 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 PRDM10Q9NQV6 1147 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 RBPJLQ9UBG7 517 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 ARMCX3Q9UH62 379 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 FBXO40Q9UH90 709 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 EPN1Q9Y6I3 576 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 PFASO15067 1338 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 NFASCO94856 1347 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 LRRC37A2A6NM11 1700 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 TMEM229AB2RXF0 380 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 NOL4O94818 638 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 UBE4BO95155 1302 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 NDUFA10O95299 355 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 PLEKP08567 350 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 PLS3P13797 630 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 RPL13P26373 211 aaKnown RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 SOX10P56693 466 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 FAM102BQ5T8I3 360 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 ABHD15Q6UXT9 468 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 RRAGAQ7L523 313 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 CYFIP1Q7L576 1253 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 TNS4Q8IZW8 715 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 FAM133AQ8N9E0 248 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF784Q8NCA9 323 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF397Q8NF99 534 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF526Q8TF50 670 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 AGPAT3Q9NRZ7 376 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 ANKEF1Q9NU02 776 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 CDV3Q9UKY7 258 aaKnown RBP10.1□□□□□ -0.79
ATG4A-202ENST00000345734 FAM184BQ9ULE4 1060 aa10.1□□□□□ -0.79
ATG4A-202ENST00000345734 PHLPP2Q6ZVD8 1323 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 TISP43B9A030 160 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 SLC16A3O15427 465 aaKnown RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 TUBB4AP04350 444 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 PGK2P07205 417 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 PSAPP07602 524 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 EPB41P11171 864 aaKnown RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 ICAM3P32942 547 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 CYP2J2P51589 502 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 DCAF17Q5H9S7 520 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 TBCELQ5QJ74 424 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 STXBP4Q6ZWJ1 553 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 PNMA8AQ86V59 439 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 GTF3C2Q8WUA4 911 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 BORCS6Q96GS4 357 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 GBP3Q9H0R5 595 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 NHEJ1Q9H9Q4 299 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 RAB6BQ9NRW1 208 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 ZNHIT6Q9NWK9 470 aaKnown RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 LARSQ9P2J5 1176 aaKnown RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 TFR2Q9UP52 801 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 PCNTO95613 3336 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 LRRC53A6NM62 1247 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 GRIN3BO60391 1043 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 EDNRBP24530 442 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 ARHGAP25P42331 645 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 PEX3P56589 373 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 PRKCEQ02156 737 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 NFIL3Q16649 462 aa10.09□□□□□ -0.79
ATG4A-202ENST00000345734 DNAJC14Q6Y2X3 702 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-202ENST00000345734 EEPD1Q7L9B9 569 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms