RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PRMT7Q9NVM4 692 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 SPTBN5Q9NRC6 3674 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 VWA3AA6NCI4 1184 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 NCLP19338 710 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 HYAL1Q12794 435 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 COL19A1Q14993 1142 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 ZRSR1Q15695 479 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 IL17AQ16552 155 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 PUS10Q3MIT2 529 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 CDCA2Q69YH5 1023 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 DEPTORQ8TB45 409 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 KIFAP3Q92845 792 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 CPB2Q96IY4 423 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 PRIMPOLQ96LW4 560 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 IGFLR1Q9H665 355 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 TSHZ2Q9NRE2 1034 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 TBC1D13Q9NVG8 400 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 FSD2A1L4K1 749 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 K7ELQ4 463 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-201ENST00000344376 ZC3H11AO75152 810 aaKnown RBP eCLIP17.78■□□□□ 0.442e-8■□□□□ 9.8
ATG4B-201ENST00000344376 OFD1O75665 1012 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 EYA4O95677 639 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 ITGA4P13612 1032 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 ARF4P18085 180 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-201ENST00000344376 IRS1P35568 1242 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 PBX3P40426 434 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 NAMPTP43490 491 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 BCAR1P56945 870 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 AMHR2Q16671 573 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 TMEM132AQ24JP5 1023 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 KCTD17Q8N5Z5 321 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 CDK5RAP3Q96JB5 506 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 NT5C3AQ9H0P0 336 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 ENTPD7Q9NQZ7 604 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 KANSL3Q9P2N6 904 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 FAM50BQ9Y247 325 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 IPPQ9Y573 584 aa17.78■□□□□ 0.44
ATG4B-201ENST00000344376 MEIS3P2A8K0S8 358 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 H3BQ06 376 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-201ENST00000344376 TNFRSF10AO00220 468 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 CDC25AP30304 524 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 BMS1Q14692 1282 aaKnown RBP17.77■□□□□ 0.44
ATG4B-201ENST00000344376 MAPK6Q16659 721 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 SLC27A1Q6PCB7 646 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 PPP4R3CPQ6ZMV5 832 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 AGMOQ6ZNB7 445 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 SLC39A11Q8N1S5 342 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 TMEM169Q96HH4 297 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 FAM193BQ96PV7 902 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-201ENST00000344376 EIF2AQ9BY44 585 aaKnown RBP17.77■□□□□ 0.44
ATG4B-201ENST00000344376 TLE6Q9H808 572 aa17.77■□□□□ 0.44
ATG4B-201ENST00000344376 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.44
ATG4B-201ENST00000344376 E9PMD0 336 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 NRIP1P48552 1158 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 CTC1Q2NKJ3 1217 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 PTCRAQ6ISU1 281 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-201ENST00000344376 SMG8Q8ND04 991 aaKnown RBP17.76■□□□□ 0.43
ATG4B-201ENST00000344376 BSNDQ8WZ55 320 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 AK8Q96MA6 479 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 CDCA3Q99618 268 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-201ENST00000344376 TCF25Q9BQ70 676 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 XIRP2A4UGR9 3374 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 VCANP13611 3396 aa17.76■□□□□ 0.43
ATG4B-201ENST00000344376 B4GALT5O43286 388 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 NDUFV1P49821 464 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 EFNA5P52803 228 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 FAM187BQ17R55 369 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 PLPP4Q5VZY2 271 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 TMC7Q7Z402 723 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 ADGRD2Q7Z7M1 963 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 RBM23Q86U06 439 aaKnown RBP17.75■□□□□ 0.43
ATG4B-201ENST00000344376 EFHBQ8N7U6 833 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 DRC1Q96MC2 740 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 MMTAG2Q9BU76 263 aaKnown RBP17.75■□□□□ 0.43
ATG4B-201ENST00000344376 FZD8Q9H461 694 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 NRDE2Q9H7Z3 1164 aa17.75■□□□□ 0.43
ATG4B-201ENST00000344376 A0A1B0GUA9 196 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 FSCN2O14926 492 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 N4BP3O15049 544 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 SLC26A4O43511 780 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 NPTXRO95502 500 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 PRKCBP05771 671 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 LIG1P18858 919 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 SYT1P21579 422 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 GTF2F1P35269 517 aaKnown RBP eCLIP17.74■□□□□ 0.431e-8■■■□□ 15.9
ATG4B-201ENST00000344376 ERVFC1P60507 584 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 PRPF4BQ13523 1007 aaKnown RBP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 HYIQ5T013 277 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 TIPINQ9BVW5 301 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 APOL6Q9BWW8 343 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 PCDHGC5Q9Y5F6 944 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 PHLPP2Q6ZVD8 1323 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 SSBP05455 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 SRGAP2BP0DMP2 458 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms