RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 TADA2AO75478 443 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CRCPO75575 148 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SLC25A27O95847 323 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 PAMP19021 973 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 HNRNPH2P55795 449 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 IKBKEQ14164 716 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 LUZP2Q86TE4 346 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SLFN12Q8IYM2 578 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 PROM2Q8N271 834 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 APPBP2Q92624 585 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 MOSPD1Q9UJG1 213 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ANAPC5Q9UJX4 755 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ITM2BQ9Y287 266 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SSC5DA1L4H1 1573 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 DICER1Q9UPY3 1922 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ZC3H4Q9UPT8 1303 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CUTAO60888 179 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 XYLBO75191 536 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RASA1P20936 1047 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 JAK1P23458 1154 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ZAP70P43403 619 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 EIF4A1P60842 406 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ABCE1P61221 599 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 FAM189A2Q15884 450 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RASIP1Q5U651 963 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ANGEL2Q5VTE6 544 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RRAGBQ5VZM2 374 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SYDE1Q6ZW31 735 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ENOSF1Q7L5Y1 443 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GSTA5Q7RTV2 222 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 KRT25Q7Z3Z0 450 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 C7orf61Q8IZ16 206 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 TMIEQ8NEW7 156 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 NCLNQ969V3 563 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ELP3Q9H9T3 547 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SERPINA10Q9UK55 444 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ANKRD12Q6UB98 2062 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SYNCRIPO60506 623 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GDF11O95390 407 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 MCF2P10911 925 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CYP2C19P33261 490 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RAP1GAPP47736 663 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SCNN1DP51172 638 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 THNSL1Q8IYQ7 743 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 OR6J1Q8NGC5 347 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SH3TC2Q8TF17 1288 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GCOM2Q9BZD3 368 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 DACT1Q9NYF0 836 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SUN2Q9UH99 717 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ABLIM1O14639 778 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 RGS16O15492 202 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 FARP2O94887 1054 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 CFBP00751 764 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 ANXA1P04083 346 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SMARCA1P28370 1054 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SNRPFP62306 86 aaKnown RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 PLD1Q13393 1074 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 RARS2Q5T160 578 aaKnown RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 TWF2Q6IBS0 349 aaKnown RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 BTNL9Q6UXG8 535 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 ERO1BQ86YB8 467 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SH2D3CQ8N5H7 860 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 AADATQ8N5Z0 425 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 DEPTORQ8TB45 409 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 EPAS1Q99814 870 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 FRMD8P1Q9BZ68 369 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SMURF2Q9HAU4 748 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 CHCHD3Q9NX63 227 aaKnown RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 NOP53Q9NZM5 478 aaKnown RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 RABL2AQ9UBK7 228 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 NARFQ9UHQ1 456 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 RABL2BQ9UNT1 228 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 C10orf71Q711Q0 1435 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 PNPLA6Q8IY17 1366 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 DOCK2Q92608 1830 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 CABYRO75952 493 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 CYP2B6P20813 491 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 PIK3CBP42338 1070 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SOX10P56693 466 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 RAB14P61106 215 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 MDM2Q00987 491 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 MYL7Q01449 175 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 CDR2Q01850 454 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SCARF1Q14162 830 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 NUGGCQ68CJ6 796 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 RINT1Q6NUQ1 792 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 MIGA2Q7L4E1 593 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF557Q8N988 423 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 STKLD1Q8NE28 680 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 ASPSCR1Q9BZE9 553 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 KLHL4Q9C0H6 718 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 GPR108Q9NPR9 543 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 LSM7Q9UK45 103 aaKnown RBP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 ATAD5Q96QE3 1844 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SF3B1O75533 1304 aaKnown RBP eCLIP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 USP17L15C9J2P7 530 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 USP17L13C9JLJ4 530 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 USP17L11C9JVI0 530 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 USP17L18D6R9N7 530 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 USP17L22D6RA61 530 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms