RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 AGXT2Q9BYV1 514 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 PPP1R12CQ9BZL4 782 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 KCNQ5Q9NR82 932 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 MED24O75448 989 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 VSNL1P62760 191 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 PDCLQ13371 301 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 FAM133BQ5BKY9 247 aaKnown RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 RUSC1Q9BVN2 902 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 SLC16A3O15427 465 aaKnown RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 GLE1Q53GS7 698 aaKnown RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 DCLK2Q8N568 766 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 CPA5Q8WXQ8 436 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 APEX2Q9UBZ4 518 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 DIS3Q9Y2L1 958 aaKnown RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 ANKRD65E5RJM6 399 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 GMNNO75496 209 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 GGPS1O95749 300 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 PLEKP08567 350 aaPredicted RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 CIITAP33076 1130 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 PYROXD1Q8WU10 500 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 FUCA2Q9BTY2 467 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 HAUS2Q9NVX0 235 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 SPDYE16A6NNV3 312 aaPredicted RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 MIF4GDA9UHW6 222 aaKnown RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 NPEPPSP55786 919 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 COL9A3Q14050 684 aaPredicted RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 SPDYE2Q495Y8 402 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 SPATA4Q8NEY3 305 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 FAF2Q96CS3 445 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 RPA1P27694 616 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 GARSP41250 739 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 SLC35G2Q8TBE7 412 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 AMACRQ9UHK6 382 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 EVI5O60447 810 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 TADA3O75528 432 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 HDLBPQ00341 1268 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 IFT122Q9HBG6 1241 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 RRP15Q9Y3B9 282 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 PSMC1P62191 440 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 IRX4P78413 519 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 SLC18A3Q16572 532 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 ZDHHC15Q96MV8 337 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 FNDC3AQ9Y2H6 1198 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 SUN1O94901 812 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 SESN3P58005 492 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 SNRNP35Q16560 246 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 ARHGAP24Q8N264 748 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 EXOC4Q96A65 974 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 C3P01024 1663 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 PODXLO00592 558 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 RWDD4Q6NW29 188 aaKnown RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 RFFLQ8WZ73 363 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 GOLPH3Q9H4A6 298 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 SUCLA2Q9P2R7 463 aaPredicted RBP13.9□□□□□ -0.18
VSTM4-202ENST00000332853 SNX12Q9UMY4 172 aa13.9□□□□□ -0.18
VSTM4-202ENST00000332853 MT-ND3P03897 115 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 FDX1P10109 184 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 TBXAS1P24557 533 aaPredicted RBP13.89□□□□□ -0.19
VSTM4-202ENST00000332853 ADORA2BP29275 332 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 PRKCEQ02156 737 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 C2orf40Q9H1Z8 148 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 ADAM21Q9UKJ8 722 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 PRKCBP05771 671 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 RASSF2P50749 326 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 RCN2Q14257 317 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 SMAD1Q15797 465 aaKnown RBP13.89□□□□□ -0.19
VSTM4-202ENST00000332853 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 MLXIPLQ9NP71 852 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 LPXNO60711 386 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 IL1R1P14778 569 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 RPS6P62753 249 aaKnown RBP13.89□□□□□ -0.19
VSTM4-202ENST00000332853 KDM4FA0A1W2PPD8 638 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 TXNDC9O14530 226 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 CALB1P05937 261 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 GALCP54803 685 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 TMEM62Q0P6H9 643 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 CENPUQ71F23 418 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 CCHCR1Q8TD31 782 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 PI4K2AQ9BTU6 479 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 ATMINO43313 823 aaPredicted RBP13.89□□□□□ -0.19
VSTM4-202ENST00000332853 SLC30A10Q6XR72 485 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 KIF12Q96FN5 646 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 STK33Q9BYT3 514 aa13.89□□□□□ -0.19
VSTM4-202ENST00000332853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.89□□□□□ -0.19
VSTM4-202ENST00000332853 GRIK5Q16478 980 aa13.88□□□□□ -0.19
VSTM4-202ENST00000332853 CCDC137Q6PK04 289 aaKnown RBP13.88□□□□□ -0.19
VSTM4-202ENST00000332853 RAB3IPQ96QF0 476 aaPredicted RBP13.88□□□□□ -0.19
VSTM4-202ENST00000332853 NBPF9Q3BBW0 867 aa13.88□□□□□ -0.19
VSTM4-202ENST00000332853 HMGB1P1B2RPK0 211 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms