RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 RABEP2Q9H5N1 569 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 TLR2O60603 784 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 LGALS2P05162 132 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 CD19P15391 556 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 RGS2P41220 211 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
PDGFB-201ENST00000331163 ASAP3Q8TDY4 903 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 TFRCP02786 760 aaKnown RBP17.23■□□□□ 0.35
PDGFB-201ENST00000331163 PPP1R2P41236 205 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 GBP6Q6ZN66 633 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 IMPG2Q9BZV3 1241 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 KLK14Q9P0G3 267 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 PPP2R2CQ9Y2T4 447 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 LRRC53A6NM62 1247 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 ZSCAN12O43309 604 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 CCDC175P0C221 793 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 SMPD1P17405 629 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 CA8P35219 290 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 MXI1P50539 228 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 PRPF4BQ13523 1007 aaKnown RBP17.23■□□□□ 0.35
PDGFB-201ENST00000331163 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 KIFAP3Q92845 792 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 ADAM21Q9UKJ8 722 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 INPP5FQ9Y2H2 1132 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 HES2Q9Y543 173 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 ENC1O14682 589 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 BCRP11274 1271 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 CYP2C9P11712 490 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 DLG4P78352 724 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 SP3Q02447 781 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 MAP2K5Q13163 448 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 DGKDQ16760 1214 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 CEP120Q8N960 986 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 DNAJB3Q8WWF6 145 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 BPIFA3Q9BQP9 254 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 HSD3B7Q9H2F3 369 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
PDGFB-201ENST00000331163 MYPNQ86TC9 1320 aa17.23■□□□□ 0.35
PDGFB-201ENST00000331163 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 RNF225M0QZC1 329 aaPredicted RBP17.22■□□□□ 0.35
PDGFB-201ENST00000331163 B4GALT5O43286 388 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 GYPCP04921 128 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 NOGQ13253 232 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 LAMC2Q13753 1193 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 NR1I3Q14994 352 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 ABHD15Q6UXT9 468 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 IRF2BP1Q8IU81 584 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 KIF5CO60282 957 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 GDAP1L1Q96MZ0 367 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 MYO1AQ9UBC5 1043 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 AGO2Q9UKV8 859 aaKnown RBP17.22■□□□□ 0.35
PDGFB-201ENST00000331163 TBX20Q9UMR3 447 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 LAMB1P07942 1786 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 EPHB6O15197 1021 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 FANCGO15287 622 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 CCP110O43303 1012 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 TMEM191BP0C7N4 346 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 SPATA20Q8TB22 786 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 TMEM206Q9H813 350 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 ACP6Q9NPH0 428 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 TRIM10Q9UDY6 481 aa17.22■□□□□ 0.35
PDGFB-201ENST00000331163 MYO7AQ13402 2215 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 A0A0U1RQJ8 604 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 A0A1B0GTH6 734 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 EFCAB8A8MWE9 144 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 PRKCBP05771 671 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
PDGFB-201ENST00000331163 FAM193AP78312 1265 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 ORC1Q13415 861 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 PPP2R5AQ15172 486 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 SNRNP35Q16560 246 aaKnown RBP17.21■□□□□ 0.35
PDGFB-201ENST00000331163 SFMBT2Q5VUG0 894 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 TWF2Q6IBS0 349 aaKnown RBP17.21■□□□□ 0.35
PDGFB-201ENST00000331163 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 DAW1Q8N136 415 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 SH3TC2Q8TF17 1288 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 ATRIPQ8WXE1 791 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 GPR20Q99678 358 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 ASIC2Q16515 512 aa17.21■□□□□ 0.35
PDGFB-201ENST00000331163 U2AF1L4Q8WU68 220 aaKnown RBP17.21■□□□□ 0.35
PDGFB-201ENST00000331163 M0QZ92 97 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 N4BP1O75113 896 aaKnown RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 ZRANB2O95218 330 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 RARBP10826 455 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 ZNF18P17022 549 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 KCTD19Q17RG1 926 aaPredicted RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 LONRF2Q1L5Z9 754 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 C2CD6Q53TS8 623 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 WDR44Q5JSH3 913 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 ZNF784Q8NCA9 323 aaPredicted RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 TULP2O00295 520 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 CYLC1P35663 651 aaPredicted RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 EIF4A3P38919 411 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms